Variant report

Variant	rs73429998
Chromosome Location	chr7:119942839-119942840
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr7:119942149..119944004-chr7:119974588..119977406,2	K562	blood:

Extended variants
information (count: 71 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:70)

rs_ID	r²[population]
rs1016912	1.00[AMR][1000 genomes]
rs2158709	1.00[AMR][1000 genomes]
rs4517058	1.00[AMR][1000 genomes]
rs58770951	1.00[AMR][1000 genomes]
rs58972504	1.00[AMR][1000 genomes]
rs59728669	1.00[AMR][1000 genomes]
rs60029532	1.00[AMR][1000 genomes]
rs60202137	0.88[AFR][1000 genomes]
rs73427922	1.00[AMR][1000 genomes]
rs73427928	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73427955	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73427979	1.00[AMR][1000 genomes]
rs73427998	1.00[AMR][1000 genomes]
rs73429904	1.00[AMR][1000 genomes]
rs73429907	1.00[AMR][1000 genomes]
rs73429931	1.00[AMR][1000 genomes]
rs73429933	1.00[AMR][1000 genomes]
rs73429935	1.00[AMR][1000 genomes]
rs73429941	1.00[AMR][1000 genomes]
rs73429951	1.00[AMR][1000 genomes]
rs73429955	1.00[AMR][1000 genomes]
rs73429956	1.00[AMR][1000 genomes]
rs73429957	1.00[AMR][1000 genomes]
rs73429961	1.00[AMR][1000 genomes]
rs73429963	1.00[AMR][1000 genomes]
rs73429971	1.00[AMR][1000 genomes]
rs73429973	1.00[AMR][1000 genomes]
rs73429976	1.00[AMR][1000 genomes]
rs73429978	1.00[AMR][1000 genomes]
rs73429979	1.00[AMR][1000 genomes]
rs73429980	1.00[AMR][1000 genomes]
rs73429983	1.00[AMR][1000 genomes]
rs73429987	1.00[AMR][1000 genomes]
rs73429988	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73429990	1.00[AMR][1000 genomes]
rs73429993	1.00[AMR][1000 genomes]
rs73429997	1.00[AMR][1000 genomes]
rs73429999	1.00[AMR][1000 genomes]
rs73430001	1.00[AMR][1000 genomes]
rs73431904	1.00[AMR][1000 genomes]
rs73431905	1.00[AMR][1000 genomes]
rs73431906	1.00[AMR][1000 genomes]
rs73431910	1.00[AMR][1000 genomes]
rs73431914	1.00[AMR][1000 genomes]
rs73431924	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73431928	1.00[AMR][1000 genomes]
rs73431929	1.00[AMR][1000 genomes]
rs73431934	0.85[AFR][1000 genomes]
rs73431939	0.92[AFR][1000 genomes]
rs73431940	0.92[AFR][1000 genomes]
rs73431941	0.92[AFR][1000 genomes]
rs73431945	0.85[AFR][1000 genomes]
rs73431949	0.92[AFR][1000 genomes]
rs73431961	0.92[AFR][1000 genomes]
rs73431967	0.92[AFR][1000 genomes]
rs73431976	0.92[AFR][1000 genomes]
rs73431981	0.92[AFR][1000 genomes]
rs73431995	0.88[AFR][1000 genomes]
rs73431997	0.88[AFR][1000 genomes]
rs73433810	0.88[AFR][1000 genomes]
rs73433856	0.88[AFR][1000 genomes]
rs73433871	0.88[AFR][1000 genomes]
rs73435806	0.82[AFR][1000 genomes]
rs73435860	0.88[AFR][1000 genomes]
rs73435864	0.88[AFR][1000 genomes]
rs73435871	0.88[AFR][1000 genomes]
rs73435874	0.88[AFR][1000 genomes]
rs73435889	0.85[AFR][1000 genomes]
rs73435902	0.82[AFR][1000 genomes]
rs73437811	0.82[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv608326	chr7:119828331-119995890	Enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS ZNF genes & repeats Weak transcription Bivalent Enhancer Flanking Active TSS Transcr. at gene 5' and 3' Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:119939400-119995600	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
2	chr7:119942600-119943000	Enhancers	GM12878-XiMat	blood

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