Variant report

Variant	rs73437862
Chromosome Location	chr7:120173944-120173945
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr7:120173889..120175892-chr7:120179187..120180954,2	K562	blood:
2	chr7:120169390..120172327-chr7:120172901..120174536,2	MCF-7	breast:

Extended variants
information (count: 42 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:38)

rs_ID	r²[population]
rs41483447	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs60202137	0.86[AFR][1000 genomes]
rs73423711	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73431939	0.82[AFR][1000 genomes]
rs73431940	0.82[AFR][1000 genomes]
rs73431941	0.82[AFR][1000 genomes]
rs73431949	0.82[AFR][1000 genomes]
rs73431961	0.82[AFR][1000 genomes]
rs73431967	0.82[AFR][1000 genomes]
rs73431976	0.82[AFR][1000 genomes]
rs73431981	0.82[AFR][1000 genomes]
rs73431995	0.86[AFR][1000 genomes]
rs73431997	0.86[AFR][1000 genomes]
rs73433810	0.86[AFR][1000 genomes]
rs73433856	0.86[AFR][1000 genomes]
rs73433871	0.86[AFR][1000 genomes]
rs73435860	0.86[AFR][1000 genomes]
rs73435864	0.86[AFR][1000 genomes]
rs73435871	0.86[AFR][1000 genomes]
rs73435874	0.86[AFR][1000 genomes]
rs73435889	0.89[AFR][1000 genomes]
rs73435902	0.93[AFR][1000 genomes]
rs73437811	0.93[AFR][1000 genomes]
rs73437840	1.00[AFR][1000 genomes]
rs73437865	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73437874	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73437881	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73439875	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73439879	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73439881	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73439885	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73439886	1.00[AMR][1000 genomes]
rs73439892	1.00[AMR][1000 genomes]
rs73439895	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73441808	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73441816	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73441835	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7796086	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv516686	chr7:120015843-120223084	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS Strong transcription Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	n/a	inside rSNPs	diseases
2	nsv1026821	chr7:120020317-120190437	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Genic enhancers Strong transcription Transcr. at gene 5' and 3' Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	diseases
3	nsv889116	chr7:120098304-120180671	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	Chromatin interactive region	n/a	inside rSNPs	diseases
4	nsv889117	chr7:120122040-120266458	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer Active TSS ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:120162400-120180600	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
2	chr7:120166000-120178600	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
3	chr7:120166200-120179200	Weak transcription	H1 Cell Line	embryonic stem cell

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