Variant report

Variant	rs73439881
Chromosome Location	chr7:120218600-120218601
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 32 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:30)

rs_ID	r²[population]
rs41483447	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs60202137	0.80[AFR][1000 genomes]
rs73423711	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73431995	0.80[AFR][1000 genomes]
rs73431997	0.80[AFR][1000 genomes]
rs73433810	0.80[AFR][1000 genomes]
rs73433856	0.80[AFR][1000 genomes]
rs73433871	0.80[AFR][1000 genomes]
rs73435860	0.80[AFR][1000 genomes]
rs73435864	0.80[AFR][1000 genomes]
rs73435871	0.80[AFR][1000 genomes]
rs73435874	0.80[AFR][1000 genomes]
rs73435889	0.83[AFR][1000 genomes]
rs73435902	0.87[AFR][1000 genomes]
rs73437811	0.87[AFR][1000 genomes]
rs73437840	0.93[AFR][1000 genomes]
rs73437862	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73437865	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73437874	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73437881	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73439875	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73439879	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73439885	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73439886	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73439892	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73439895	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73441808	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73441816	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73441835	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7796086	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv516686	chr7:120015843-120223084	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS Strong transcription Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	n/a	inside rSNPs	diseases
2	nsv889117	chr7:120122040-120266458	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer Active TSS ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:120200400-120223000	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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