Variant report

Variant	rs73436475
Chromosome Location	chr7:112347052-112347053
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 20 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:18)

rs_ID	r²[population]
rs17159929	1.00[EUR][1000 genomes]
rs60112566	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs61617214	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6950471	1.00[EUR][1000 genomes]
rs6960384	1.00[EUR][1000 genomes]
rs73436469	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73436487	0.91[AFR][1000 genomes];0.91[AMR][1000 genomes]
rs73436488	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73436494	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73436497	1.00[EUR][1000 genomes]
rs73436499	1.00[EUR][1000 genomes]
rs73438310	1.00[EUR][1000 genomes]
rs73438320	1.00[EUR][1000 genomes]
rs73438322	1.00[EUR][1000 genomes]
rs7784144	1.00[EUR][1000 genomes]
rs7799100	1.00[EUR][1000 genomes]
rs7801228	1.00[EUR][1000 genomes]
rs821784	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv531436	chr7:111856171-112585407	Enhancers Weak transcription Active TSS Flanking Active TSS Strong transcription Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	105 gene(s)	inside rSNPs	diseases
2	nsv889055	chr7:112174089-112353440	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:112342200-112348200	Weak transcription	Small Intestine	intestine
2	chr7:112346800-112347200	Weak transcription	Fetal Intestine Small	intestine
3	chr7:112347000-112347200	Enhancers	Fetal Lung	lung
4	chr7:112347000-112349000	Enhancers	Fetal Brain Male	brain

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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