Variant report

Variant	rs73436487
Chromosome Location	chr7:112367071-112367072
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 14 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:13)

rs_ID	r²[population]
rs60112566	0.91[AMR][1000 genomes]
rs61617214	0.91[AMR][1000 genomes]
rs6950471	0.82[AMR][1000 genomes]
rs73436469	0.82[AMR][1000 genomes]
rs73436475	0.91[AFR][1000 genomes];0.91[AMR][1000 genomes]
rs73436488	0.91[AMR][1000 genomes]
rs73436494	0.91[AMR][1000 genomes]
rs73436497	0.82[AMR][1000 genomes]
rs73436499	0.82[AMR][1000 genomes]
rs73438310	0.82[AMR][1000 genomes]
rs7784144	0.81[AMR][1000 genomes]
rs7799100	0.81[AMR][1000 genomes]
rs7801228	0.81[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv531436	chr7:111856171-112585407	Enhancers Weak transcription Active TSS Flanking Active TSS Strong transcription Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	105 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:112364600-112388400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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