Variant report

Variant	rs73480313
Chromosome Location	chr9:84614630-84614631
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 14 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:13)

rs_ID	r²[population]
rs57951881	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73463413	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73463420	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73463449	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73463466	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73463470	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73463482	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73478281	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73478292	1.00[AMR][1000 genomes]
rs73480314	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73480317	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73480322	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73480325	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831639	chr9:84501548-84651151	Enhancers Weak transcription Bivalent Enhancer ZNF genes & repeats Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:84614400-84615000	Enhancers	Pancreas	Pancrea
2	chr9:84614600-84615000	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
3	chr9:84614600-84615000	Enhancers	Fetal Adrenal Gland	Adrenal Gland
4	chr9:84614600-84615400	Enhancers	Primary B cells from peripheral blood	blood

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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