Variant report

Variant	rs73547839
Chromosome Location	chr13:37673548-37673549
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 29 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:28)

rs_ID	r²[population]
rs10507445	1.00[EUR][1000 genomes]
rs17054900	1.00[EUR][1000 genomes]
rs17054907	1.00[EUR][1000 genomes]
rs17054978	1.00[EUR][1000 genomes]
rs17054982	1.00[EUR][1000 genomes]
rs17054985	1.00[EUR][1000 genomes]
rs17054986	1.00[EUR][1000 genomes]
rs56905051	1.00[EUR][1000 genomes]
rs57149532	1.00[EUR][1000 genomes]
rs57266283	1.00[EUR][1000 genomes]
rs57806247	1.00[EUR][1000 genomes]
rs59237869	1.00[EUR][1000 genomes]
rs60677413	1.00[EUR][1000 genomes]
rs60888296	1.00[EUR][1000 genomes]
rs61559782	1.00[EUR][1000 genomes]
rs6563512	1.00[EUR][1000 genomes]
rs7139475	1.00[EUR][1000 genomes]
rs7319636	1.00[EUR][1000 genomes]
rs7325430	1.00[EUR][1000 genomes]
rs7330313	1.00[EUR][1000 genomes]
rs7330518	1.00[EUR][1000 genomes]
rs73533929	1.00[EUR][1000 genomes]
rs7985176	1.00[EUR][1000 genomes]
rs7994265	1.00[EUR][1000 genomes]
rs7996156	1.00[EUR][1000 genomes]
rs7996730	1.00[EUR][1000 genomes]
rs7997086	1.00[EUR][1000 genomes]
rs7999228	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv948975	chr13:37281203-38280430	Enhancers Flanking Active TSS Weak transcription Strong transcription Active TSS Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	50 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:37665400-37678400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr13:37673000-37673600	Genic enhancers	Primary neutrophils fromperipheralblood	blood
3	chr13:37673400-37673600	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links