Variant report

Variant	rs73551317
Chromosome Location	chr6:139757092-139757093
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 16 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:16)

rs_ID	r²[population]
rs11967877	0.89[ASN][1000 genomes]
rs17068659	0.86[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17068661	0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6910781	0.89[ASN][1000 genomes]
rs6911457	0.89[ASN][1000 genomes]
rs73566007	0.89[ASN][1000 genomes]
rs73566008	0.89[ASN][1000 genomes]
rs73566025	0.89[ASN][1000 genomes]
rs73567918	0.89[ASN][1000 genomes]
rs73775520	0.94[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs757631	0.92[ASN][1000 genomes]
rs9484272	0.90[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9495470	0.87[AFR][1000 genomes];0.86[AMR][1000 genomes];0.80[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9495473	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9495484	0.89[ASN][1000 genomes]
rs9654645	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:18 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:139747800-139757400	Weak transcription	Rectal Smooth Muscle	rectum
2	chr6:139751800-139757400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
3	chr6:139755000-139757200	Weak transcription	Colon Smooth Muscle	Colon
4	chr6:139755000-139760000	Weak transcription	Primary hematopoietic stem cells	blood
5	chr6:139755200-139757400	Weak transcription	Breast Myoepithelial Primary Cells	Breast
6	chr6:139755200-139757600	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
7	chr6:139755200-139757600	Weak transcription	NH-A	brain
8	chr6:139755200-139757800	Weak transcription	Muscle Satellite Cultured Cells	--
9	chr6:139755200-139759600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
10	chr6:139755200-139760400	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
11	chr6:139755400-139757200	Weak transcription	Hela-S3	cervix
12	chr6:139755400-139759600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
13	chr6:139755400-139764600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
14	chr6:139755600-139757400	Weak transcription	Fetal Heart	heart
15	chr6:139755600-139760600	Weak transcription	Primary hematopoietic stem cells short term culture	blood
16	chr6:139755600-139763200	Weak transcription	Primary neutrophils fromperipheralblood	blood
17	chr6:139756000-139760400	Weak transcription	K562	blood
18	chr6:139756200-139757400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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