Variant report

Variant	rs9484272
Chromosome Location	chr6:139750933-139750934
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:139741799..139744406-chr6:139748409..139752579,3	K562	blood:
2	chr6:139741702..139744406-chr6:139748336..139753642,6	K562	blood:

Extended variants
information (count: 16 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:16)

rs_ID	r²[population]
rs11967877	1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[ASN][1000 genomes]
rs17068659	0.82[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17068661	0.82[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6910781	1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[ASN][1000 genomes]
rs6911457	0.89[ASN][1000 genomes]
rs73551317	0.90[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73566007	0.89[ASN][1000 genomes]
rs73566008	0.89[ASN][1000 genomes]
rs73566025	0.89[ASN][1000 genomes]
rs73567918	0.89[ASN][1000 genomes]
rs73775520	0.91[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs757631	0.92[ASN][1000 genomes]
rs9495470	0.97[AFR][1000 genomes];0.89[AMR][1000 genomes];0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9495473	0.89[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9495484	1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[ASN][1000 genomes]
rs9654645	0.90[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:20 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:139743800-139754600	Weak transcription	Stomach Mucosa	stomach
2	chr6:139746800-139754600	Weak transcription	Colon Smooth Muscle	Colon
3	chr6:139747800-139757400	Weak transcription	Rectal Smooth Muscle	rectum
4	chr6:139750200-139751400	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
5	chr6:139750200-139752400	Enhancers	Primary monocytes fromperipheralblood	blood
6	chr6:139750400-139751200	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
7	chr6:139750400-139751200	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
8	chr6:139750400-139751200	Enhancers	K562	blood
9	chr6:139750400-139751400	Enhancers	Primary neutrophils fromperipheralblood	blood
10	chr6:139750400-139751400	Enhancers	Primary hematopoietic stem cells short term culture	blood
11	chr6:139750400-139751400	Enhancers	Cortex derived primary cultured neurospheres	brain
12	chr6:139750400-139751400	Enhancers	Monocytes-CD14+_RO01746	blood
13	chr6:139750600-139751000	Enhancers	HUES6 Cell Line	embryonic stem cell
14	chr6:139750600-139751000	Enhancers	iPS-18 Cell Line	embryonic stem cell
15	chr6:139750600-139751200	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
16	chr6:139750600-139751200	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
17	chr6:139750800-139751200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
18	chr6:139750800-139751200	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
19	chr6:139750800-139751200	Enhancers	Fetal Stomach	stomach
20	chr6:139750800-139751400	Enhancers	Placenta Amnion	Placenta Amnion

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