Variant report

Variant	rs73566007
Chromosome Location	chr6:139761377-139761378
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 16 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:16)

rs_ID	r²[population]
rs11967877	0.84[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17068659	0.89[ASN][1000 genomes]
rs17068661	0.92[ASN][1000 genomes]
rs6910781	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6911457	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73551317	0.89[ASN][1000 genomes]
rs73566008	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73566025	1.00[ASN][1000 genomes]
rs73567918	0.87[AFR][1000 genomes];0.82[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73775520	0.89[ASN][1000 genomes]
rs757631	0.82[ASN][1000 genomes]
rs9484272	0.89[ASN][1000 genomes]
rs9495470	0.89[ASN][1000 genomes]
rs9495473	0.89[ASN][1000 genomes]
rs9495484	0.84[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9654645	0.89[ASN][1000 genomes]

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:139755400-139764600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
2	chr6:139755600-139763200	Weak transcription	Primary neutrophils fromperipheralblood	blood
3	chr6:139758200-139764200	Weak transcription	Fetal Kidney	kidney
4	chr6:139758400-139763400	Weak transcription	Placenta	Placenta
5	chr6:139758400-139764600	Weak transcription	Cortex derived primary cultured neurospheres	brain
6	chr6:139759600-139761800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
7	chr6:139760000-139761400	Enhancers	Primary hematopoietic stem cells	blood
8	chr6:139760400-139762200	Enhancers	K562	blood
9	chr6:139760600-139762000	Enhancers	Primary hematopoietic stem cells short term culture	blood
10	chr6:139760800-139768200	Weak transcription	HUES6 Cell Line	embryonic stem cell
11	chr6:139761000-139761800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
12	chr6:139761000-139764800	Weak transcription	Fetal Stomach	stomach
13	chr6:139761000-139766000	Weak transcription	Fetal Lung	lung

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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