Variant report

Variant	rs7358964
Chromosome Location	chr13:97814626-97814627
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 16 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs10161888	0.90[AFR][1000 genomes];0.88[EUR][1000 genomes]
rs16953867	1.00[CEU][hapmap];1.00[MEX][hapmap];0.81[TSI][hapmap]
rs59939527	0.85[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs7317617	0.90[AFR][1000 genomes];0.88[EUR][1000 genomes]
rs7332122	0.89[AFR][1000 genomes];0.88[EUR][1000 genomes]
rs7332935	0.85[AMR][1000 genomes]
rs7334833	1.00[CEU][hapmap]
rs7335512	0.90[AFR][1000 genomes];0.85[EUR][1000 genomes]
rs73553593	0.80[AMR][1000 genomes]
rs73555705	0.85[AMR][1000 genomes]
rs74107562	0.85[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs7984448	0.89[AFR][1000 genomes];0.88[EUR][1000 genomes]
rs7988970	0.89[AFR][1000 genomes];0.85[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs9582110	1.00[CEU][hapmap]
rs9652111	0.94[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1137	chr13:97803474-97848814	Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Bivalent Enhancer	TF binding region Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:97799200-97814800	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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