Variant report

Variant	rs73729674
Chromosome Location	chr6:35988582-35988583
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 20 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:18)

rs_ID	r²[population]
rs1100857	1.00[ASN][1000 genomes]
rs1100859	1.00[ASN][1000 genomes]
rs1100860	1.00[ASN][1000 genomes]
rs2815806	1.00[ASN][1000 genomes]
rs6457879	1.00[ASN][1000 genomes]
rs707994	1.00[ASN][1000 genomes]
rs851004	1.00[ASN][1000 genomes]
rs851008	1.00[ASN][1000 genomes]
rs851009	1.00[ASN][1000 genomes]
rs851011	1.00[ASN][1000 genomes]
rs851012	1.00[ASN][1000 genomes]
rs851015	1.00[ASN][1000 genomes]
rs851016	1.00[ASN][1000 genomes]
rs851021	1.00[ASN][1000 genomes]
rs851022	1.00[ASN][1000 genomes]
rs851023	1.00[ASN][1000 genomes]
rs916344	1.00[ASN][1000 genomes]
rs916345	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3363467	chr6:35820920-36222197	Enhancers Strong transcription Bivalent Enhancer Active TSS Genic enhancers Flanking Active TSS Weak transcription Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	41 gene(s)	inside rSNPs	diseases
2	nsv528432	chr6:35958871-36035354	Weak transcription Enhancers Flanking Active TSS Strong transcription Active TSS Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	15 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:35964800-35991800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr6:35987200-35991600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
3	chr6:35987400-35991400	Weak transcription	Primary hematopoietic stem cells	blood
4	chr6:35987400-35991600	Weak transcription	Primary hematopoietic stem cells short term culture	blood
5	chr6:35987400-35991600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
6	chr6:35988000-35989600	Enhancers	Primary neutrophils fromperipheralblood	blood
7	chr6:35988000-35991400	Weak transcription	Monocytes-CD14+_RO01746	blood
8	chr6:35988200-35991600	Weak transcription	Primary monocytes fromperipheralblood	blood
9	chr6:35988400-35991600	Weak transcription	Cortex derived primary cultured neurospheres	brain

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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