Variant report

Variant	rs73751720
Chromosome Location	chr6:73233234-73233235
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 47 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:45)

rs_ID	r²[population]
rs10805963	0.85[AFR][1000 genomes]
rs1112877	1.00[EUR][1000 genomes]
rs16882541	1.00[EUR][1000 genomes]
rs16882560	1.00[EUR][1000 genomes]
rs16882626	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs16882652	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs4088773	1.00[EUR][1000 genomes]
rs55676608	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs55817542	1.00[EUR][1000 genomes]
rs55885580	1.00[EUR][1000 genomes]
rs56173098	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs58136138	1.00[EUR][1000 genomes]
rs59070352	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs59119615	1.00[EUR][1000 genomes]
rs59508897	1.00[EUR][1000 genomes]
rs60830036	1.00[EUR][1000 genomes]
rs60941898	1.00[EUR][1000 genomes]
rs61530646	1.00[EUR][1000 genomes]
rs6453590	1.00[EUR][1000 genomes]
rs6907438	1.00[EUR][1000 genomes]
rs6917358	1.00[EUR][1000 genomes]
rs6929554	1.00[EUR][1000 genomes]
rs6931019	1.00[EUR][1000 genomes]
rs73751722	1.00[EUR][1000 genomes]
rs73751723	1.00[EUR][1000 genomes]
rs73751728	1.00[EUR][1000 genomes]
rs73751730	1.00[EUR][1000 genomes]
rs73751731	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73751732	1.00[EUR][1000 genomes]
rs73751734	1.00[EUR][1000 genomes]
rs73753349	1.00[EUR][1000 genomes]
rs73753351	1.00[EUR][1000 genomes]
rs73753353	1.00[EUR][1000 genomes]
rs73753354	1.00[EUR][1000 genomes]
rs73753355	1.00[EUR][1000 genomes]
rs73753357	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73753358	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73753363	1.00[EUR][1000 genomes]
rs73754703	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7754398	1.00[EUR][1000 genomes]
rs7757187	1.00[EUR][1000 genomes]
rs7757848	1.00[EUR][1000 genomes]
rs7773525	1.00[EUR][1000 genomes]
rs7774395	1.00[EUR][1000 genomes]
rs9446671	0.83[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1023809	chr6:73157813-73477997	Bivalent Enhancer Weak transcription Flanking Bivalent TSS/Enh Enhancers Active TSS ZNF genes & repeats Flanking Active TSS Strong transcription Bivalent/Poised TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
2	nsv538303	chr6:73157813-73477997	Active TSS Weak transcription Enhancers Strong transcription Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:73232400-73234200	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
2	chr6:73232400-73234400	Enhancers	NHEK	skin
3	chr6:73232800-73233600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
4	chr6:73232800-73234400	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
5	chr6:73232800-73243000	Weak transcription	K562	blood

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