Variant report

Variant	rs73760822
Chromosome Location	chr6:100690846-100690847
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 24 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs11962725	1.00[AMR][1000 genomes]
rs11964322	1.00[AMR][1000 genomes]
rs55692601	1.00[AMR][1000 genomes]
rs56176715	1.00[AMR][1000 genomes]
rs56876848	1.00[AMR][1000 genomes]
rs57335321	1.00[AMR][1000 genomes]
rs59301700	1.00[AMR][1000 genomes]
rs60973981	1.00[AMR][1000 genomes]
rs73760809	1.00[AMR][1000 genomes]
rs73760820	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73760821	1.00[AMR][1000 genomes]
rs73760824	1.00[AMR][1000 genomes]
rs73760825	1.00[AMR][1000 genomes]
rs73760826	1.00[AMR][1000 genomes]
rs73760828	1.00[AMR][1000 genomes]
rs73760831	1.00[AMR][1000 genomes]
rs73760853	1.00[AMR][1000 genomes]
rs73760862	1.00[AMR][1000 genomes]
rs73760864	1.00[AMR][1000 genomes]
rs73760865	1.00[AMR][1000 genomes]
rs73760866	1.00[AMR][1000 genomes]
rs73760870	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv604262	chr6:100661336-100701917	Active TSS Enhancers Flanking Bivalent TSS/Enh Weak transcription Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
2	esv1795039	chr6:100674799-100691977	Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:100685400-100695200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
2	chr6:100690800-100691200	Weak transcription	Pancreatic Islets	Pancreatic Islet

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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