The 2.0 version of rSNPBase

Variant report

Variant rs73778690
Chromosome Location chr6:144113462-144113463
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:107 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:144067800-144122000 Weak transcription Colonic Mucosa Colon
2 chr6:144070200-144122000 Weak transcription Small Intestine intestine
3 chr6:144077800-144122000 Weak transcription Fetal Brain Male brain
4 chr6:144080600-144122000 Weak transcription Primary T helper naive cells fromperipheralblood blood
5 chr6:144083600-144128600 Weak transcription Hela-S3 cervix
6 chr6:144085000-144113800 Weak transcription Brain Inferior Temporal Lobe brain
7 chr6:144085200-144113800 Weak transcription Brain Hippocampus Middle brain
8 chr6:144087000-144122000 Weak transcription Pancreas Pancrea
9 chr6:144088800-144113600 Weak transcription A549 lung
10 chr6:144096400-144122000 Weak transcription Stomach Mucosa stomach
11 chr6:144096600-144113600 Strong transcription Placenta Placenta
12 chr6:144096600-144113800 Weak transcription Colon Smooth Muscle Colon
13 chr6:144096600-144122000 Weak transcription Psoas Muscle Psoas
14 chr6:144098400-144113800 Weak transcription Gastric stomach
15 chr6:144102000-144122000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
16 chr6:144102600-144122000 Weak transcription Primary T helper naive cells from peripheral blood blood
17 chr6:144104600-144114200 Strong transcription Primary neutrophils fromperipheralblood blood
18 chr6:144104800-144113600 Strong transcription Fetal Muscle Trunk muscle
19 chr6:144105600-144122000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
20 chr6:144107000-144114000 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
21 chr6:144107600-144117600 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
22 chr6:144107800-144122000 Weak transcription iPS-15b Cell Line embryonic stem cell
23 chr6:144108000-144130400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
24 chr6:144108200-144114800 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
25 chr6:144108400-144114000 Strong transcription Primary T helper cells fromperipheralblood blood
26 chr6:144108400-144114800 Strong transcription Monocytes-CD14+_RO01746 blood
27 chr6:144108400-144122000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
28 chr6:144108400-144122000 Weak transcription Muscle Satellite Cultured Cells --
29 chr6:144108400-144125400 Weak transcription NH-A brain
30 chr6:144108600-144113600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
31 chr6:144108600-144113600 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
32 chr6:144108600-144113800 Weak transcription Brain Substantia Nigra brain
33 chr6:144109200-144114400 Strong transcription HUES64 Cell Line embryonic stem cell
34 chr6:144109200-144114800 Strong transcription Primary T regulatory cells fromperipheralblood blood
35 chr6:144109400-144117400 Strong transcription HUES48 Cell Line embryonic stem cell
36 chr6:144109600-144114600 Strong transcription H1 Cell Line embryonic stem cell
37 chr6:144109600-144115000 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
38 chr6:144109800-144114200 Strong transcription Liver Liver
39 chr6:144109800-144114400 Strong transcription Rectal Mucosa Donor 31 rectum
40 chr6:144109800-144114600 Strong transcription iPS-20b Cell Line embryonic stem cell
41 chr6:144109800-144114800 Strong transcription Primary Natural Killer cells fromperipheralblood blood
42 chr6:144109800-144136600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
43 chr6:144110000-144113600 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
44 chr6:144110000-144114600 Strong transcription Primary hematopoietic stem cells short term culture blood
45 chr6:144110400-144114200 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
46 chr6:144111000-144143800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
47 chr6:144111200-144122000 Weak transcription Primary T killer memory cells from peripheral blood blood
48 chr6:144111400-144122000 Weak transcription Skeletal Muscle Male skeletal muscle
49 chr6:144111400-144126800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
50 chr6:144111400-144127400 Weak transcription NHLF lung

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Last update: Aug 31, 2015