The 2.0 version of rSNPBase

Variant report

Variant rs73892534
Chromosome Location chr21:17152549-17152550
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:122 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr21:17125800-17153400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
2 chr21:17127000-17152800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
3 chr21:17127200-17153400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
4 chr21:17127400-17153400 Weak transcription Brain Cingulate Gyrus brain
5 chr21:17127800-17152800 Weak transcription Fetal Intestine Large intestine
6 chr21:17130800-17156800 Weak transcription ES-WA7 Cell Line embryonic stem cell
7 chr21:17132800-17153400 Weak transcription Spleen Spleen
8 chr21:17134000-17153400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
9 chr21:17134200-17153000 Weak transcription Fetal Muscle Trunk muscle
10 chr21:17134200-17153400 Weak transcription Stomach Smooth Muscle stomach
11 chr21:17134200-17154000 Weak transcription H9 Cell Line embryonic stem cell
12 chr21:17134400-17153200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
13 chr21:17135000-17152600 Weak transcription Primary T cells from cord blood blood
14 chr21:17135000-17153000 Weak transcription H1 Cell Line embryonic stem cell
15 chr21:17135000-17153400 Weak transcription Cortex derived primary cultured neurospheres brain
16 chr21:17135000-17153600 Weak transcription Primary T killer memory cells from peripheral blood blood
17 chr21:17135200-17153000 Weak transcription Fetal Muscle Leg muscle
18 chr21:17135400-17153200 Weak transcription Rectal Mucosa Donor 29 rectum
19 chr21:17135600-17153200 Weak transcription Rectal Mucosa Donor 31 rectum
20 chr21:17136600-17153200 Weak transcription Thymus Thymus
21 chr21:17138600-17152800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
22 chr21:17139800-17153000 Weak transcription Primary T regulatory cells fromperipheralblood blood
23 chr21:17139800-17153400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
24 chr21:17139800-17153400 Weak transcription Aorta Aorta
25 chr21:17140000-17152800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
26 chr21:17140200-17153400 Weak transcription Brain Anterior Caudate brain
27 chr21:17140400-17152600 Weak transcription Primary T helper naive cells from peripheral blood blood
28 chr21:17140800-17153000 Weak transcription K562 blood
29 chr21:17140800-17153400 Weak transcription Duodenum Mucosa Duodenum
30 chr21:17140800-17154200 Weak transcription Stomach Mucosa stomach
31 chr21:17141000-17152800 Weak transcription Primary T cells fromperipheralblood blood
32 chr21:17142600-17153000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
33 chr21:17142600-17153600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
34 chr21:17142600-17154000 Weak transcription Brain Hippocampus Middle brain
35 chr21:17142800-17152600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
36 chr21:17143200-17152800 Weak transcription Hela-S3 cervix
37 chr21:17143600-17153000 Weak transcription Primary B cells from peripheral blood blood
38 chr21:17144000-17153200 Weak transcription Ovary ovary
39 chr21:17144000-17153400 Weak transcription Lung lung
40 chr21:17144000-17153800 Weak transcription Right Ventricle heart
41 chr21:17144200-17153200 Weak transcription GM12878-XiMat blood
42 chr21:17145600-17153000 Weak transcription Primary T helper naive cells fromperipheralblood blood
43 chr21:17145600-17153000 Weak transcription Fetal Thymus thymus
44 chr21:17145600-17153200 Weak transcription Left Ventricle heart
45 chr21:17145600-17153400 Weak transcription Esophagus oesophagus
46 chr21:17145600-17153400 Weak transcription Fetal Stomach stomach
47 chr21:17145800-17152800 Weak transcription Breast Myoepithelial Primary Cells Breast
48 chr21:17145800-17152800 Weak transcription Primary hematopoietic stem cells blood
49 chr21:17145800-17153000 Weak transcription Primary hematopoietic stem cells short term culture blood
50 chr21:17145800-17153000 Weak transcription Fetal Adrenal Gland Adrenal Gland

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Last update: Aug 31, 2015