The 2.0 version of rSNPBase

Variant report

Variant rs73892551
Chromosome Location chr21:17209243-17209244
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:116 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr21:17155200-17209800 Weak transcription Rectal Smooth Muscle rectum
2 chr21:17155200-17252800 Weak transcription Fetal Brain Male brain
3 chr21:17178400-17248200 Weak transcription Esophagus oesophagus
4 chr21:17178400-17252800 Weak transcription iPS-15b Cell Line embryonic stem cell
5 chr21:17178800-17211400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
6 chr21:17182400-17227800 Weak transcription Psoas Muscle Psoas
7 chr21:17184000-17209800 Weak transcription Stomach Smooth Muscle stomach
8 chr21:17188000-17214000 Weak transcription Gastric stomach
9 chr21:17188000-17229400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
10 chr21:17188000-17240200 Weak transcription Brain Inferior Temporal Lobe brain
11 chr21:17188200-17213400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
12 chr21:17188200-17246800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
13 chr21:17188400-17247200 Weak transcription Ovary ovary
14 chr21:17188400-17253200 Weak transcription Fetal Brain Female brain
15 chr21:17188600-17210000 Weak transcription Aorta Aorta
16 chr21:17188600-17210400 Weak transcription Fetal Intestine Small intestine
17 chr21:17188600-17213400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
18 chr21:17188800-17247000 Weak transcription Brain Germinal Matrix brain
19 chr21:17188800-17252600 Weak transcription ES-I3 Cell Line embryonic stem cell
20 chr21:17190200-17245400 Weak transcription Lung lung
21 chr21:17190200-17247200 Weak transcription Pancreas Pancrea
22 chr21:17190400-17247200 Weak transcription Spleen Spleen
23 chr21:17190400-17247400 Weak transcription Cortex derived primary cultured neurospheres brain
24 chr21:17191000-17227800 Weak transcription Colonic Mucosa Colon
25 chr21:17191800-17211600 Weak transcription NH-A brain
26 chr21:17191800-17212800 Weak transcription Fetal Muscle Trunk muscle
27 chr21:17194000-17209600 Weak transcription Osteobl bone
28 chr21:17194200-17228000 Weak transcription Small Intestine intestine
29 chr21:17194800-17218000 Weak transcription Hela-S3 cervix
30 chr21:17197200-17218400 Strong transcription Primary Natural Killer cells fromperipheralblood blood
31 chr21:17198000-17214200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
32 chr21:17198000-17248000 Weak transcription H9 Cell Line embryonic stem cell
33 chr21:17199400-17218800 Weak transcription Right Ventricle heart
34 chr21:17199600-17209600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
35 chr21:17199600-17210200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
36 chr21:17199600-17213200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
37 chr21:17199800-17214200 Weak transcription Primary T helper naive cells fromperipheralblood blood
38 chr21:17199800-17246800 Weak transcription H1 Cell Line embryonic stem cell
39 chr21:17199800-17247200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
40 chr21:17200000-17211800 Weak transcription NHEK skin
41 chr21:17200000-17213400 Weak transcription NHDF-Ad bronchial
42 chr21:17200800-17245200 Weak transcription Skeletal Muscle Male skeletal muscle
43 chr21:17201200-17230200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
44 chr21:17201400-17245400 Weak transcription Fetal Stomach stomach
45 chr21:17204200-17210800 Weak transcription Primary T killer naive cells fromperipheralblood blood
46 chr21:17204200-17213400 Weak transcription NHLF lung
47 chr21:17204400-17209600 Weak transcription Duodenum Smooth Muscle Duodenum
48 chr21:17204400-17209800 Weak transcription Skeletal Muscle Female skeletal muscle
49 chr21:17204400-17239000 Weak transcription Brain Substantia Nigra brain
50 chr21:17204400-17246400 Weak transcription Brain Angular Gyrus brain

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Last update: Aug 31, 2015