Variant report
Variant | rs74099422 |
---|---|
Chromosome Location | chr1:90786572-90786573 |
allele | A/C/T |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:1)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
(count:1 , 50 per page) page:
1
No. | Distal block | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr1:90781760..90784219-chr1:90784830..90787274,2 | K562 | blood: |
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs12092500 | 1.00[AMR][1000 genomes] |
rs12095022 | 1.00[AMR][1000 genomes] |
rs57222141 | 1.00[AMR][1000 genomes] |
rs6657163 | 1.00[AMR][1000 genomes] |
rs74099403 | 1.00[AMR][1000 genomes] |
rs74099406 | 1.00[AMR][1000 genomes] |
rs74099407 | 1.00[AMR][1000 genomes] |
rs74099412 | 1.00[AMR][1000 genomes] |
rs74099413 | 1.00[AMR][1000 genomes] |
rs74099428 | 0.88[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs74099431 | 1.00[AMR][1000 genomes] |
rs74099432 | 1.00[AMR][1000 genomes] |
rs74099434 | 1.00[AMR][1000 genomes] |
rs74099437 | 1.00[AMR][1000 genomes] |
rs74099605 | 1.00[AMR][1000 genomes] |
rs74102642 | 0.83[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs74102645 | 1.00[AMR][1000 genomes] |
rs7549917 | 1.00[AMR][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | nsv524317 | chr1:90729744-90836739 | Bivalent Enhancer Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Strong transcription | Chromatin interactive regionlncRNA | 1 gene(s) | inside rSNPs | diseases |
2 | nsv521123 | chr1:90770566-90836739 | Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS Strong transcription ZNF genes & repeats | Chromatin interactive regionlncRNA | n/a | inside rSNPs | diseases |
3 | nsv870546 | chr1:90783440-90816579 | Enhancers Bivalent Enhancer Weak transcription Flanking Active TSS Strong transcription ZNF genes & repeats | Chromatin interactive region | n/a | inside rSNPs | diseases |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr1:90785800-90787000 | Enhancers | Fetal Muscle Leg | muscle |