Variant report

Variant	rs74151706
Chromosome Location	chr10:93441350-93441351
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:93439340..93443358-chr10:93444027..93446342,3	MCF-7	breast:
2	chr10:93440121..93442029-chr10:93445363..93447595,2	K562	blood:

Extended variants
information (count: 17 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:16)

rs_ID	r²[population]
rs11186620	1.00[EUR][1000 genomes]
rs17106748	1.00[EUR][1000 genomes]
rs55959635	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs56128562	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs56131496	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs57722499	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs59099210	1.00[EUR][1000 genomes]
rs59996150	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7086499	1.00[EUR][1000 genomes]
rs7100259	1.00[EUR][1000 genomes]
rs74149293	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs74151705	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7907539	1.00[EUR][1000 genomes]
rs7912945	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7923529	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9664423	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv895892	chr10:93432632-93470167	Weak transcription Flanking Active TSS Enhancers Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	n/a

No data

Chromatin state (count:43 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:93424800-93449800	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
2	chr10:93427000-93443400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
3	chr10:93427600-93448800	Weak transcription	Liver	Liver
4	chr10:93432400-93442800	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
5	chr10:93432600-93441400	Weak transcription	HSMM	muscle
6	chr10:93432600-93441400	Weak transcription	NHLF	lung
7	chr10:93436400-93441400	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
8	chr10:93438200-93441400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
9	chr10:93439200-93444600	Enhancers	Breast Myoepithelial Primary Cells	Breast
10	chr10:93439400-93449600	Weak transcription	Aorta	Aorta
11	chr10:93440000-93442000	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
12	chr10:93440000-93442200	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
13	chr10:93440000-93442600	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
14	chr10:93440000-93443400	Enhancers	Muscle Satellite Cultured Cells	--
15	chr10:93440000-93443400	Enhancers	NHEK	skin
16	chr10:93440000-93443600	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
17	chr10:93440000-93444400	Enhancers	Cortex derived primary cultured neurospheres	brain
18	chr10:93440200-93442000	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
19	chr10:93440400-93442000	Enhancers	Fetal Brain Male	brain
20	chr10:93440400-93442200	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
21	chr10:93440600-93442400	Enhancers	Skeletal Muscle Male	skeletal muscle
22	chr10:93440600-93443600	Enhancers	NHDF-Ad	bronchial
23	chr10:93440600-93444600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
24	chr10:93440600-93445000	Enhancers	HMEC	breast
25	chr10:93441000-93441800	Enhancers	Duodenum Smooth Muscle	Duodenum
26	chr10:93441000-93441800	Enhancers	NH-A	brain
27	chr10:93441000-93442000	Enhancers	H1 Cell Line	embryonic stem cell
28	chr10:93441000-93442000	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
29	chr10:93441000-93442000	Enhancers	Brain Hippocampus Middle	brain
30	chr10:93441000-93442000	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain
31	chr10:93441000-93442000	Enhancers	Fetal Brain Female	brain
32	chr10:93441000-93442200	Enhancers	Brain Angular Gyrus	brain
33	chr10:93441000-93442600	Enhancers	Fetal Heart	heart
34	chr10:93441200-93441400	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
35	chr10:93441200-93441600	Enhancers	Fetal Muscle Trunk	muscle
36	chr10:93441200-93442000	Weak transcription	HUES64 Cell Line	embryonic stem cell
37	chr10:93441200-93442000	Enhancers	iPS-15b Cell Line	embryonic stem cell
38	chr10:93441200-93442000	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
39	chr10:93441200-93442000	Enhancers	Osteobl	bone
40	chr10:93441200-93442200	Enhancers	Brain Germinal Matrix	brain
41	chr10:93441200-93442400	Enhancers	Left Ventricle	heart
42	chr10:93441200-93443400	Weak transcription	iPS-20b Cell Line	embryonic stem cell
43	chr10:93441200-93445000	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung

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