Variant report

Variant	rs74156840
Chromosome Location	chr1:211009520-211009521
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 21 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs1125262	0.86[ASN][1000 genomes]
rs1343144	0.92[ASN][1000 genomes]
rs1604372	0.84[ASN][1000 genomes]
rs17016993	0.99[ASN][1000 genomes]
rs4504958	0.90[ASN][1000 genomes]
rs4951486	0.88[ASN][1000 genomes]
rs4951668	0.82[AFR][1000 genomes];0.94[ASN][1000 genomes]
rs4951679	0.87[AFR][1000 genomes];0.89[ASN][1000 genomes]
rs55717804	0.84[ASN][1000 genomes]
rs56144254	0.84[ASN][1000 genomes]
rs57449301	0.90[ASN][1000 genomes]
rs60645773	0.96[ASN][1000 genomes]
rs60927621	0.92[ASN][1000 genomes]
rs6699321	0.87[ASN][1000 genomes]
rs74156835	0.96[ASN][1000 genomes]
rs74156847	0.90[ASN][1000 genomes]
rs74156848	0.92[ASN][1000 genomes]
rs7517580	0.98[ASN][1000 genomes]
rs7520112	0.98[ASN][1000 genomes]
rs9661403	0.86[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832503	chr1:210948760-211103163	Weak transcription Enhancers Strong transcription Active TSS Genic enhancers Flanking Active TSS ZNF genes & repeats Bivalent Enhancer	TF binding region Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:210996600-211015000	Weak transcription	Brain Hippocampus Middle	brain
2	chr1:211005200-211014200	Weak transcription	HSMMtube	muscle

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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