Variant report

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs10037564	0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs10043734	0.82[EUR][1000 genomes]
rs10043747	0.83[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs10044393	0.90[AMR][1000 genomes];0.84[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs10941260	0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs11957963	0.92[AMR][1000 genomes];0.84[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12152782	0.86[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs12697350	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4869462	0.88[AMR][1000 genomes];0.84[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4869464	0.90[AMR][1000 genomes];0.84[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4869623	0.90[ASN][1000 genomes]
rs62353695	0.90[AMR][1000 genomes];0.83[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs6451213	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6451217	0.88[AMR][1000 genomes];0.83[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs6451218	0.88[AMR][1000 genomes];0.83[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs6891098	0.84[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs6898958	0.81[AMR][1000 genomes];0.86[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs7447119	0.85[EUR][1000 genomes]
rs7447153	0.85[EUR][1000 genomes]
rs7705904	0.89[ASN][1000 genomes]
rs7710255	0.86[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs9292608	0.94[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv525477	chr5:35530905-35792990	Weak transcription Enhancers Strong transcription Flanking Active TSS Active TSS Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
2	nsv968824	chr5:35740416-35743870	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:35737400-35743000	Weak transcription	Fetal Kidney	kidney
2	chr5:35739800-35742600	Weak transcription	Pancreas	Pancrea
3	chr5:35741200-35742200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
4	chr5:35741200-35742800	Enhancers	NHDF-Ad	bronchial
5	chr5:35741800-35742200	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
6	chr5:35742000-35743000	Enhancers	Muscle Satellite Cultured Cells	--

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