The 2.0 version of rSNPBase

Variant report

Variant rs7480354
Chromosome Location chr11:86060192-86060193
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:73 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:86014400-86066600 Weak transcription HSMMtube muscle
2 chr11:86014600-86066400 Weak transcription Fetal Kidney kidney
3 chr11:86015000-86061000 Weak transcription Muscle Satellite Cultured Cells --
4 chr11:86022000-86061000 Weak transcription Esophagus oesophagus
5 chr11:86023800-86061200 Weak transcription Brain Inferior Temporal Lobe brain
6 chr11:86025000-86061600 Weak transcription Psoas Muscle Psoas
7 chr11:86033400-86066400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
8 chr11:86035400-86066600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
9 chr11:86040800-86060800 Weak transcription Brain Angular Gyrus brain
10 chr11:86047800-86067800 Weak transcription ES-I3 Cell Line embryonic stem cell
11 chr11:86048400-86070200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
12 chr11:86049400-86067800 Weak transcription iPS-18 Cell Line embryonic stem cell
13 chr11:86049600-86060800 Weak transcription A549 lung
14 chr11:86049600-86062600 Weak transcription Skeletal Muscle Male skeletal muscle
15 chr11:86049600-86065200 Weak transcription Fetal Brain Female brain
16 chr11:86049600-86066400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
17 chr11:86049600-86066800 Weak transcription HUVEC blood vessel
18 chr11:86049600-86067600 Weak transcription H1 Cell Line embryonic stem cell
19 chr11:86049800-86060800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
20 chr11:86049800-86060800 Weak transcription Colon Smooth Muscle Colon
21 chr11:86049800-86061800 Weak transcription Cortex derived primary cultured neurospheres brain
22 chr11:86049800-86062600 Weak transcription Stomach Smooth Muscle stomach
23 chr11:86049800-86068000 Weak transcription iPS-20b Cell Line embryonic stem cell
24 chr11:86050000-86060600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
25 chr11:86050000-86060800 Weak transcription Skeletal Muscle Female skeletal muscle
26 chr11:86050000-86061000 Weak transcription GM12878-XiMat blood
27 chr11:86050000-86072000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
28 chr11:86050400-86061400 Weak transcription Fetal Intestine Small intestine
29 chr11:86050600-86061000 Weak transcription Primary hematopoietic stem cells short term culture blood
30 chr11:86050600-86063200 Weak transcription Brain Germinal Matrix brain
31 chr11:86050600-86068200 Weak transcription HUES64 Cell Line embryonic stem cell
32 chr11:86051400-86060800 Weak transcription Fetal Lung lung
33 chr11:86056400-86060400 Weak transcription Duodenum Smooth Muscle Duodenum
34 chr11:86058000-86060400 Weak transcription Aorta Aorta
35 chr11:86058000-86060800 Weak transcription Left Ventricle heart
36 chr11:86058000-86060800 Weak transcription Sigmoid Colon Sigmoid Colon
37 chr11:86058000-86063600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
38 chr11:86058000-86063600 Weak transcription Fetal Stomach stomach
39 chr11:86058000-86067600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
40 chr11:86058200-86060200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
41 chr11:86058200-86060400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
42 chr11:86058200-86062400 Weak transcription Rectal Mucosa Donor 29 rectum
43 chr11:86058200-86062600 Weak transcription Fetal Adrenal Gland Adrenal Gland
44 chr11:86058200-86062600 Weak transcription Fetal Muscle Leg muscle
45 chr11:86058200-86071200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
46 chr11:86058400-86060200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
47 chr11:86058400-86060200 Weak transcription NHDF-Ad bronchial
48 chr11:86058400-86060800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
49 chr11:86058400-86060800 Weak transcription Liver Liver
50 chr11:86058400-86060800 Weak transcription Duodenum Mucosa Duodenum

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Last update: Aug 31, 2015