Variant report

Variant	rs7523281
Chromosome Location	chr1:211184719-211184720
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 25 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs11119635	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11119653	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11119661	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11119665	0.82[AFR][1000 genomes]
rs12057232	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12072849	0.90[AFR][1000 genomes];0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12080732	0.90[AFR][1000 genomes];0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12081478	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12084848	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12086827	0.84[AFR][1000 genomes]
rs12087790	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17017085	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1933520	1.00[ASN][1000 genomes]
rs56919772	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs57821233	0.88[AFR][1000 genomes];0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs58216144	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs59431775	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs59797977	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6540646	0.90[AFR][1000 genomes];0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6671576	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73073450	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7523925	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7531557	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7556274	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7556549	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:211180600-211187000	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
2	chr1:211181200-211186600	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
3	chr1:211181400-211185000	Weak transcription	HSMM	muscle
4	chr1:211181800-211193800	Weak transcription	Brain Anterior Caudate	brain
5	chr1:211182000-211186600	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
6	chr1:211182800-211228600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
7	chr1:211183400-211185400	Strong transcription	HSMMtube	muscle

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