Variant report

Variant rs753784
Chromosome Location chr18:29938394-29938395
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:39 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr18:29926800-29951000 Weak transcription Brain Inferior Temporal Lobe brain
2 chr18:29930000-29938400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr18:29930000-29939600 Weak transcription Fetal Stomach stomach
4 chr18:29930000-29947600 Weak transcription Esophagus oesophagus
5 chr18:29930200-29945400 Weak transcription Fetal Intestine Small intestine
6 chr18:29930200-29945600 Weak transcription Fetal Intestine Large intestine
7 chr18:29930200-29953600 Weak transcription Fetal Muscle Leg muscle
8 chr18:29931200-29948000 Weak transcription Brain Angular Gyrus brain
9 chr18:29931400-29940400 Weak transcription Brain Substantia Nigra brain
10 chr18:29931600-29942000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
11 chr18:29932600-29943600 Weak transcription HUES48 Cell Line embryonic stem cell
12 chr18:29932800-29954000 Weak transcription Ovary ovary
13 chr18:29933000-29948000 Weak transcription Brain Hippocampus Middle brain
14 chr18:29933600-29939400 Weak transcription Stomach Mucosa stomach
15 chr18:29934800-29945600 Weak transcription Aorta Aorta
16 chr18:29935600-29939800 Enhancers Fetal Heart heart
17 chr18:29936200-29942000 Weak transcription HSMM muscle
18 chr18:29936400-29940600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
19 chr18:29936400-29942000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
20 chr18:29936800-29938400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
21 chr18:29936800-29938400 Enhancers Placenta Placenta
22 chr18:29936800-29940000 Enhancers Pancreas Pancrea
23 chr18:29936800-29942400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
24 chr18:29937000-29939000 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
25 chr18:29937000-29939000 Enhancers Left Ventricle heart
26 chr18:29937000-29946200 Weak transcription Duodenum Smooth Muscle Duodenum
27 chr18:29937400-29939000 Enhancers Right Atrium heart
28 chr18:29937400-29939600 Enhancers Fetal Adrenal Gland Adrenal Gland
29 chr18:29937600-29952600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
30 chr18:29938000-29938800 Enhancers H9 Cell Line embryonic stem cell
31 chr18:29938000-29941800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
32 chr18:29938200-29938400 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
33 chr18:29938200-29938400 Enhancers Brain Anterior Caudate brain
34 chr18:29938200-29938400 Enhancers Gastric stomach
35 chr18:29938200-29938600 Enhancers ES-I3 Cell Line embryonic stem cell
36 chr18:29938200-29939000 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
37 chr18:29938200-29939000 Enhancers iPS-15b Cell Line embryonic stem cell
38 chr18:29938200-29939000 Enhancers Lung lung
39 chr18:29938200-29948000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung

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