Variant report

Variant	rs7581834
Chromosome Location	chr2:113639230-113639231
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr2:113636674..113639363-chr2:113640556..113642756,3	K562	blood:
2	chr2:113635520..113637327-chr2:113638337..113640428,2	K562	blood:
3	chr2:113625233..113627510-chr2:113637612..113639730,2	MCF-7	breast:

Extended variants
information (count: 31 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:31)

rs_ID	r²[population]
rs11674397	0.91[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs11676969	0.81[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs11677903	0.80[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs11680584	0.83[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs11680975	0.83[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs11681359	0.91[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs11683669	0.88[CEU][hapmap];0.82[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs11685418	0.87[CEU][hapmap];0.82[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs11689621	0.82[CEU][hapmap];0.82[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs11692391	0.87[CEU][hapmap];0.82[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs11692429	0.88[CEU][hapmap];0.82[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs11694258	0.87[EUR][1000 genomes]
rs11694657	0.88[CEU][hapmap];0.82[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs11694863	0.88[CEU][hapmap];0.82[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs11696002	0.88[CEU][hapmap];0.82[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs17042591	0.87[CEU][hapmap];0.82[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs3811046	1.00[JPT][hapmap]
rs3811047	1.00[JPT][hapmap]
rs3923566	0.83[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs4074747	0.88[CEU][hapmap];0.83[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs4257410	0.87[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs4334503	0.91[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs4458215	0.89[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs4592853	0.87[EUR][1000 genomes]
rs55798477	0.81[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs55953396	0.94[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs59995729	0.82[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs7563305	0.89[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs7597623	0.83[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs7600475	0.87[CEU][hapmap];0.82[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs7602576	0.83[AMR][1000 genomes];0.87[EUR][1000 genomes]

No data

Chromatin state (count:48 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:113629200-113643200	Weak transcription	Right Atrium	heart
2	chr2:113632800-113641600	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
3	chr2:113632800-113644400	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
4	chr2:113633000-113640600	Enhancers	HMEC	breast
5	chr2:113634000-113640200	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
6	chr2:113636400-113640400	Enhancers	Primary hematopoietic stem cells short term culture	blood
7	chr2:113636800-113639600	Bivalent Enhancer	HepG2	liver
8	chr2:113636800-113640000	Enhancers	Primary monocytes fromperipheralblood	blood
9	chr2:113636800-113640200	Enhancers	NHDF-Ad	bronchial
10	chr2:113637000-113639600	Enhancers	Hela-S3	cervix
11	chr2:113637000-113640000	Enhancers	Brain Hippocampus Middle	brain
12	chr2:113637000-113643600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
13	chr2:113637200-113639600	Enhancers	NH-A	brain
14	chr2:113637200-113640400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
15	chr2:113637400-113639400	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
16	chr2:113637400-113639400	Enhancers	HSMM	muscle
17	chr2:113637400-113639600	Enhancers	Primary hematopoietic stem cells	blood
18	chr2:113637400-113639800	Enhancers	Muscle Satellite Cultured Cells	--
19	chr2:113637400-113640000	Enhancers	Fetal Adrenal Gland	Adrenal Gland
20	chr2:113637400-113640000	Enhancers	Osteobl	bone
21	chr2:113637600-113639600	Enhancers	HUVEC	blood vessel
22	chr2:113637600-113640000	Enhancers	Brain Anterior Caudate	brain
23	chr2:113637800-113639400	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain
24	chr2:113637800-113639600	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
25	chr2:113637800-113639800	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
26	chr2:113637800-113639800	Enhancers	Brain Cingulate Gyrus	brain
27	chr2:113638000-113639600	Enhancers	Brain Angular Gyrus	brain
28	chr2:113638000-113639600	Enhancers	Brain Substantia Nigra	brain
29	chr2:113638000-113639800	Enhancers	Brain Inferior Temporal Lobe	brain
30	chr2:113638000-113639800	Enhancers	HSMMtube	muscle
31	chr2:113638200-113639600	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
32	chr2:113638200-113639600	Enhancers	K562	blood
33	chr2:113638200-113640000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
34	chr2:113638200-113640600	Weak transcription	Pancreas	Pancrea
35	chr2:113638400-113642400	Weak transcription	Primary T cells fromperipheralblood	blood
36	chr2:113638600-113639400	Enhancers	iPS-20b Cell Line	embryonic stem cell
37	chr2:113638600-113642400	Weak transcription	Fetal Thymus	thymus
38	chr2:113638800-113639400	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
39	chr2:113638800-113639600	Enhancers	Primary neutrophils fromperipheralblood	blood
40	chr2:113639000-113639400	Enhancers	HUES6 Cell Line	embryonic stem cell
41	chr2:113639200-113639400	Enhancers	Monocytes-CD14+_RO01746	blood
42	chr2:113639200-113640400	Enhancers	GM12878-XiMat	blood
43	chr2:113639200-113642200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
44	chr2:113639200-113642200	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
45	chr2:113639200-113642400	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
46	chr2:113639200-113642400	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
47	chr2:113639200-113644400	Enhancers	NHEK	skin
48	chr2:113639200-113647800	Weak transcription	Rectal Mucosa Donor 31	rectum

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