Variant report

Variant	rs7588792
Chromosome Location	chr2:212626917-212626918
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 12 )
Associated
traits (count: 1 )

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs10175461	1.00[YRI][hapmap]
rs12469039	0.90[YRI][hapmap]
rs13004899	0.84[CEU][hapmap];0.83[EUR][1000 genomes]
rs6435671	0.94[TSI][hapmap];0.90[YRI][hapmap]
rs6435672	0.88[TSI][hapmap];0.90[YRI][hapmap]
rs6706010	0.87[ASW][hapmap];0.94[CEU][hapmap];0.85[GIH][hapmap];1.00[MEX][hapmap];0.90[TSI][hapmap];0.90[YRI][hapmap];0.87[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs6746063	0.98[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs7421820	0.84[CEU][hapmap]
rs7570613	0.90[YRI][hapmap];0.84[AMR][1000 genomes]
rs7597007	0.90[YRI][hapmap]
rs7605314	0.90[YRI][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv34128	chr2:212581485-212857122	Weak transcription Enhancers Active TSS Flanking Active TSS Strong transcription ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs7588792	ACADL	cis	parietal	SCAN

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:212621200-212632800	Weak transcription	Aorta	Aorta
2	chr2:212626600-212628800	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
3	chr2:212626800-212627000	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
4	chr2:212626800-212627800	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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