Variant report

Variant	rs7605314
Chromosome Location	chr2:212619025-212619026
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 17 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:16)

rs_ID	r²[population]
rs10175461	1.00[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12469039	0.82[ASW][hapmap];0.96[CEU][hapmap];0.82[CHB][hapmap];0.84[CHD][hapmap];0.88[GIH][hapmap];0.82[MEX][hapmap];0.81[MKK][hapmap];0.93[TSI][hapmap];1.00[YRI][hapmap]
rs13004899	0.82[CHB][hapmap]
rs13015253	0.83[CHB][hapmap];0.85[CHD][hapmap]
rs13030667	0.88[CEU][hapmap];0.90[EUR][1000 genomes]
rs6435671	0.82[CHB][hapmap];0.86[JPT][hapmap];1.00[YRI][hapmap]
rs6435672	0.85[JPT][hapmap];1.00[YRI][hapmap]
rs6706010	0.86[CHB][hapmap];0.84[CHD][hapmap];1.00[YRI][hapmap]
rs6706030	0.92[CEU][hapmap];0.91[EUR][1000 genomes]
rs6711487	0.90[ASW][hapmap];0.92[CEU][hapmap];0.91[CHB][hapmap];0.95[CHD][hapmap];0.83[GIH][hapmap];0.86[JPT][hapmap];0.90[MEX][hapmap];0.85[MKK][hapmap];0.84[TSI][hapmap]
rs6722824	0.84[CEU][hapmap];0.86[TSI][hapmap];0.87[EUR][1000 genomes]
rs6746063	0.80[AFR][1000 genomes];0.96[ASN][1000 genomes]
rs7570613	0.95[CHB][hapmap];0.95[JPT][hapmap];1.00[YRI][hapmap];0.98[ASN][1000 genomes]
rs7576466	0.89[AFR][1000 genomes];0.99[ASN][1000 genomes]
rs7588792	0.90[YRI][hapmap]
rs7597007	0.92[CEU][hapmap];0.95[CHB][hapmap];0.91[JPT][hapmap];1.00[YRI][hapmap];0.90[EUR][1000 genomes];0.91[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv34128	chr2:212581485-212857122	Weak transcription Enhancers Active TSS Flanking Active TSS Strong transcription ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:212610200-212626600	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
2	chr2:212617000-212620800	Weak transcription	Fetal Lung	lung

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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