Variant report

Variant	rs6711487
Chromosome Location	chr2:212597041-212597042
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 16 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs10175461	0.89[CEU][hapmap];0.85[CHB][hapmap];0.85[JPT][hapmap];0.82[AMR][1000 genomes];0.92[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs12469039	0.96[CEU][hapmap];0.91[CHB][hapmap];0.85[CHD][hapmap];0.95[GIH][hapmap];0.82[JPT][hapmap];0.90[MEX][hapmap];0.91[TSI][hapmap]
rs13004899	0.82[CHB][hapmap]
rs13015253	0.83[CHB][hapmap];0.89[CHD][hapmap];0.91[JPT][hapmap]
rs13030667	0.80[CEU][hapmap];0.86[EUR][1000 genomes]
rs6435671	0.82[CHB][hapmap];0.81[JPT][hapmap]
rs6435672	0.81[JPT][hapmap]
rs6706010	0.86[CHB][hapmap];0.85[CHD][hapmap];0.80[ASN][1000 genomes]
rs6706030	0.92[CEU][hapmap];0.92[YRI][hapmap];0.81[AFR][1000 genomes];0.91[EUR][1000 genomes]
rs6722824	0.84[CEU][hapmap];0.81[TSI][hapmap];0.87[EUR][1000 genomes]
rs6746063	0.92[ASN][1000 genomes]
rs7570613	0.95[CHB][hapmap];0.91[JPT][hapmap];0.90[ASN][1000 genomes]
rs7576466	0.90[ASN][1000 genomes]
rs7597007	1.00[CEU][hapmap];0.95[CHB][hapmap];0.95[JPT][hapmap];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7605314	0.90[ASW][hapmap];0.92[CEU][hapmap];0.91[CHB][hapmap];0.95[CHD][hapmap];0.83[GIH][hapmap];0.86[JPT][hapmap];0.90[MEX][hapmap];0.85[MKK][hapmap];0.84[TSI][hapmap];0.90[EUR][1000 genomes];0.89[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv34128	chr2:212581485-212857122	Weak transcription Enhancers Active TSS Flanking Active TSS Strong transcription ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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