Variant report

Variant	rs6706030
Chromosome Location	chr2:212601058-212601059
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr2:212593545..212595397-chr2:212598538..212601478,2	MCF-7	breast:

Extended variants
information (count: 44 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:43)

rs_ID	r²[population]
rs10175461	0.90[CEU][hapmap];0.93[EUR][1000 genomes]
rs10432443	0.86[CHB][hapmap]
rs10932396	0.86[CHB][hapmap]
rs10932397	0.86[CHB][hapmap]
rs10932398	0.86[CHB][hapmap]
rs10932400	0.86[CHB][hapmap]
rs11685867	0.86[CHB][hapmap]
rs12052854	0.83[CHB][hapmap]
rs12469039	0.96[CEU][hapmap]
rs13004180	0.83[CHB][hapmap]
rs13004391	0.83[CHB][hapmap]
rs13004899	0.87[CHB][hapmap];0.91[ASN][1000 genomes]
rs13008293	0.87[CHB][hapmap]
rs13008313	0.91[CHB][hapmap]
rs13008370	0.81[CHB][hapmap]
rs13010892	0.82[CHB][hapmap]
rs13013901	0.86[CHB][hapmap]
rs13023789	0.87[CHB][hapmap]
rs13024502	0.87[CHB][hapmap]
rs13025068	0.82[CHB][hapmap]
rs13030400	0.83[CHB][hapmap]
rs13030667	0.89[CEU][hapmap];1.00[CHB][hapmap];0.80[JPT][hapmap];0.93[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs13030927	0.87[CHB][hapmap]
rs35761042	0.92[ASN][1000 genomes]
rs6435665	0.82[CHB][hapmap];0.81[JPT][hapmap]
rs6435666	0.86[CHB][hapmap]
rs6435671	0.82[YRI][hapmap]
rs6707801	0.86[CHB][hapmap]
rs6711487	0.92[CEU][hapmap];0.92[YRI][hapmap]
rs6722322	0.86[CHB][hapmap]
rs6722824	0.92[CEU][hapmap];0.95[CHB][hapmap];0.85[JPT][hapmap];0.81[AMR][1000 genomes];0.95[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs6731471	0.82[CHB][hapmap]
rs6738017	0.83[CHB][hapmap]
rs6738219	0.87[CHB][hapmap]
rs6740215	0.86[CHB][hapmap]
rs6749096	0.83[CHB][hapmap]
rs6757068	0.82[CHB][hapmap]
rs7419259	0.82[CHB][hapmap]
rs7558449	0.91[CHB][hapmap]
rs7582099	0.83[CHB][hapmap]
rs7593713	0.83[CHB][hapmap];0.81[JPT][hapmap]
rs7597007	0.92[CEU][hapmap];0.91[EUR][1000 genomes]
rs7605314	0.92[CEU][hapmap];0.91[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv34128	chr2:212581485-212857122	Weak transcription Enhancers Active TSS Flanking Active TSS Strong transcription ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:212600800-212601800	Weak transcription	Fetal Heart	heart

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