Variant report

Variant	rs6722824
Chromosome Location	chr2:212605282-212605283
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 43 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:42)

rs_ID	r²[population]
rs10175461	0.89[EUR][1000 genomes]
rs10432443	0.82[CHB][hapmap];0.89[CHD][hapmap]
rs10432526	0.80[ASN][1000 genomes]
rs10932396	0.81[CHB][hapmap]
rs10932397	0.82[CHB][hapmap];0.86[CHD][hapmap]
rs10932398	0.82[CHB][hapmap];0.89[CHD][hapmap]
rs10932400	0.82[CHB][hapmap];0.89[CHD][hapmap]
rs11685867	0.81[CHB][hapmap];0.83[JPT][hapmap]
rs11690747	0.83[ASN][1000 genomes]
rs12469039	0.88[CEU][hapmap];0.91[TSI][hapmap]
rs13004899	0.85[CHB][hapmap];0.87[YRI][hapmap];0.98[ASN][1000 genomes]
rs13008293	0.82[CHB][hapmap]
rs13008313	0.91[CHB][hapmap]
rs13008370	0.86[CHB][hapmap];0.86[CHD][hapmap];0.85[JPT][hapmap]
rs13010892	0.83[ASN][1000 genomes]
rs13013901	0.82[CHB][hapmap];0.89[CHD][hapmap]
rs13020626	0.84[ASN][1000 genomes]
rs13023789	0.82[CHB][hapmap]
rs13024502	0.82[CHB][hapmap]
rs13025068	0.89[CHD][hapmap];0.81[ASN][1000 genomes]
rs13030667	0.96[CEU][hapmap];0.95[CHB][hapmap];0.85[JPT][hapmap];0.80[AMR][1000 genomes];0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs13030927	0.82[CHB][hapmap]
rs34269326	0.82[ASN][1000 genomes]
rs34776422	0.84[ASN][1000 genomes]
rs34937662	0.82[ASN][1000 genomes]
rs35761042	0.99[ASN][1000 genomes]
rs6435665	0.89[CHD][hapmap];0.85[JPT][hapmap];0.82[ASN][1000 genomes]
rs6435666	0.82[CHB][hapmap];0.89[CHD][hapmap]
rs6706030	0.92[CEU][hapmap];0.95[CHB][hapmap];0.85[JPT][hapmap];0.81[AMR][1000 genomes];0.95[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs6707801	0.82[CHB][hapmap];0.89[CHD][hapmap]
rs6711487	0.84[CEU][hapmap];0.81[TSI][hapmap]
rs6722322	0.82[CHB][hapmap];0.89[CHD][hapmap];0.90[JPT][hapmap];0.84[YRI][hapmap];0.83[ASN][1000 genomes]
rs6731471	0.89[CHD][hapmap]
rs6738219	0.82[CHB][hapmap];0.90[JPT][hapmap];0.82[ASN][1000 genomes]
rs6740215	0.82[CHB][hapmap];0.89[CHD][hapmap];0.90[JPT][hapmap]
rs6757068	0.89[CHD][hapmap]
rs71422755	0.84[ASN][1000 genomes]
rs7419259	0.89[CHD][hapmap]
rs7558449	0.86[CHB][hapmap]
rs7593713	0.85[JPT][hapmap];0.82[ASN][1000 genomes]
rs7597007	0.84[CEU][hapmap];0.86[EUR][1000 genomes]
rs7605314	0.84[CEU][hapmap];0.86[TSI][hapmap];0.87[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv34128	chr2:212581485-212857122	Weak transcription Enhancers Active TSS Flanking Active TSS Strong transcription ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:212602400-212606200	Weak transcription	Fetal Heart	heart

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