Variant report

rSNPs within LD-proxies of this variant (count:29)

rs_ID	r²[population]
rs11685867	0.83[JPT][hapmap]
rs12052854	0.90[JPT][hapmap]
rs12104496	0.86[CHB][hapmap];0.81[JPT][hapmap]
rs13004180	0.85[JPT][hapmap]
rs13004391	0.85[JPT][hapmap]
rs13008370	1.00[CEU][hapmap];0.95[CHB][hapmap];0.95[JPT][hapmap];0.95[YRI][hapmap]
rs13023789	0.81[JPT][hapmap]
rs13024502	0.81[JPT][hapmap]
rs13030400	0.85[JPT][hapmap]
rs13030667	0.91[CHB][hapmap];0.95[JPT][hapmap]
rs13030927	0.81[JPT][hapmap]
rs35761042	0.81[EUR][1000 genomes]
rs4673633	0.81[CHB][hapmap];0.85[JPT][hapmap]
rs59568831	0.81[ASN][1000 genomes]
rs59779307	0.89[AFR][1000 genomes];0.99[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs59804958	0.83[ASN][1000 genomes]
rs60490270	0.83[ASN][1000 genomes]
rs6706030	0.91[CHB][hapmap]
rs6722824	0.91[CHB][hapmap]
rs6731471	0.85[JPT][hapmap]
rs6738017	0.85[JPT][hapmap]
rs6749096	0.85[JPT][hapmap]
rs6757068	0.85[JPT][hapmap]
rs73069350	0.81[ASN][1000 genomes]
rs73069352	0.81[ASN][1000 genomes]
rs73069355	0.81[ASN][1000 genomes]
rs7419259	0.85[JPT][hapmap]
rs7558449	0.80[CHB][hapmap]
rs7582099	0.85[JPT][hapmap]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv34128	chr2:212581485-212857122	Weak transcription Enhancers Active TSS Flanking Active TSS Strong transcription ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
2	nsv963773	chr2:212638550-212645592	Enhancers Weak transcription	TF binding region	2 gene(s)	inside rSNPs	diseases
3	nsv875784	chr2:212639948-212761152	Enhancers Active TSS Weak transcription Flanking Active TSS	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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