Variant report

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs10177211	0.92[ASN][1000 genomes]
rs10177258	0.93[ASN][1000 genomes]
rs10469656	0.84[ASN][1000 genomes]
rs10497949	0.94[EUR][1000 genomes]
rs12104775	0.93[ASN][1000 genomes]
rs12469375	0.88[ASN][1000 genomes]
rs12694246	0.83[EUR][1000 genomes]
rs1829612	0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1829613	0.81[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs1851175	0.96[EUR][1000 genomes]
rs1851176	0.96[EUR][1000 genomes]
rs1851177	0.86[ASN][1000 genomes]
rs1851190	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1851194	0.94[EUR][1000 genomes]
rs1851195	0.85[EUR][1000 genomes]
rs3863853	0.96[EUR][1000 genomes]
rs4605309	0.90[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs7349376	0.97[ASN][1000 genomes]
rs7565192	0.94[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs7601664	0.88[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv584321	chr2:212446818-212511895	Enhancers Active TSS Weak transcription Genic enhancers Flanking Active TSS ZNF genes & repeats Strong transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
2	esv2754366	chr2:212470494-212541494	Weak transcription Enhancers Active TSS ZNF genes & repeats Strong transcription Genic enhancers Flanking Active TSS	TF binding region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:212467400-212546800	Weak transcription	Aorta	Aorta
2	chr2:212470400-212489600	Weak transcription	Fetal Heart	heart
3	chr2:212477000-212480800	Weak transcription	Pancreas	Pancrea
4	chr2:212480000-212481000	Genic enhancers	H9 Derived Neuron Cultured Cells	ES cell derived

Quick Search: