Variant report

Variant	rs7713811
Chromosome Location	chr5:57496382-57496383
allele	A/C/G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 1 )

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs11739055	1.00[ASN][1000 genomes]
rs11741711	1.00[ASN][1000 genomes]
rs11742619	1.00[CHB][hapmap];1.00[ASN][1000 genomes]
rs2409014	1.00[ASN][1000 genomes]
rs2962010	0.92[CEU][hapmap];1.00[CHB][hapmap];0.86[YRI][hapmap];0.91[ASN][1000 genomes]
rs2962015	1.00[CHB][hapmap];0.91[ASN][1000 genomes]
rs2964182	0.92[CEU][hapmap];1.00[CHB][hapmap];0.86[YRI][hapmap];0.91[ASN][1000 genomes]
rs2964183	0.92[CEU][hapmap];1.00[CHB][hapmap];0.96[YRI][hapmap];0.91[ASN][1000 genomes]
rs2964185	1.00[CHB][hapmap];0.91[ASN][1000 genomes]
rs2964186	0.89[AFR][1000 genomes];0.83[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs35359164	1.00[ASN][1000 genomes]
rs56160829	0.91[ASN][1000 genomes]
rs73757719	1.00[ASN][1000 genomes]
rs7721911	0.81[EUR][1000 genomes]
rs988696	1.00[ASN][1000 genomes]

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs7713811	GZMA	cis	cerebellum	SCAN

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:57487800-57497600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
2	chr5:57495400-57500600	Weak transcription	Aorta	Aorta

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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