Variant report

Variant	rs2962015
Chromosome Location	chr5:57469770-57469771
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 16 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs11739055	0.91[ASN][1000 genomes]
rs11741711	0.91[ASN][1000 genomes]
rs11742619	1.00[CHB][hapmap];0.91[ASN][1000 genomes]
rs2161512	0.87[CEU][hapmap];0.85[EUR][1000 genomes]
rs2409014	0.91[ASN][1000 genomes]
rs2962010	1.00[CHB][hapmap];1.00[ASN][1000 genomes]
rs2964182	1.00[CHB][hapmap];1.00[ASN][1000 genomes]
rs2964183	1.00[CHB][hapmap];1.00[ASN][1000 genomes]
rs2964185	0.87[CEU][hapmap];1.00[CHB][hapmap];0.91[YRI][hapmap];0.91[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2964186	1.00[ASN][1000 genomes]
rs35359164	0.91[ASN][1000 genomes]
rs56160829	1.00[ASN][1000 genomes]
rs73757719	0.91[ASN][1000 genomes]
rs7713811	0.91[ASN][1000 genomes]
rs988696	0.91[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1033051	chr5:57380218-57471801	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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dbSNP/dbVar ID: rs12345 /nsv7879
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chromosomal regions: chr1:12345-34567

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