Variant report
| Variant | rs7717636 |
|---|---|
| Chromosome Location | chr5:43555102-43555103 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr5:43524000-43555200 | Strong transcription | Primary Natural Killer cells fromperipheralblood | blood |
| 2 | chr5:43527600-43555600 | Strong transcription | Fetal Thymus | thymus |
| 3 | chr5:43527600-43556000 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
| 4 | chr5:43542800-43556000 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 5 | chr5:43542800-43556000 | Weak transcription | Esophagus | oesophagus |
| 6 | chr5:43547600-43555200 | Weak transcription | Colonic Mucosa | Colon |
| 7 | chr5:43547800-43556000 | Weak transcription | Gastric | stomach |
| 8 | chr5:43548000-43555200 | Weak transcription | Placenta Amnion | Placenta Amnion |
| 9 | chr5:43548000-43556000 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 10 | chr5:43548200-43555200 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 11 | chr5:43549600-43555400 | Weak transcription | Primary neutrophils fromperipheralblood | blood |
| 12 | chr5:43549600-43555800 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 13 | chr5:43549600-43556200 | Weak transcription | Spleen | Spleen |
| 14 | chr5:43550200-43556000 | Weak transcription | Lung | lung |
| 15 | chr5:43550400-43555400 | Genic enhancers | Primary T helper cells PMA-I stimulated | -- |
| 16 | chr5:43550400-43555600 | Genic enhancers | Primary T helper cells fromperipheralblood | blood |
| 17 | chr5:43551200-43555800 | Enhancers | Primary T helper naive cells from peripheral blood | blood |
| 18 | chr5:43551600-43555200 | Genic enhancers | Breast Myoepithelial Primary Cells | Breast |
| 19 | chr5:43552400-43555200 | Transcr. at gene 5' and 3' | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 20 | chr5:43552400-43556000 | Weak transcription | ES-WA7 Cell Line | embryonic stem cell |
| 21 | chr5:43552800-43555600 | Enhancers | Primary T killer memory cells from peripheral blood | blood |
| 22 | chr5:43552800-43555600 | Genic enhancers | Adipose Nuclei | Adipose |
| 23 | chr5:43552800-43556000 | Enhancers | Primary T helper memory cells from peripheral blood 1 | blood |
| 24 | chr5:43553200-43555400 | Enhancers | Small Intestine | intestine |
| 25 | chr5:43553200-43555600 | Enhancers | Primary T killer naive cells fromperipheralblood | blood |
| 26 | chr5:43553200-43556000 | Transcr. at gene 5' and 3' | Dnd41 | blood |
| 27 | chr5:43553400-43555200 | Enhancers | Brain Anterior Caudate | brain |
| 28 | chr5:43553400-43555400 | Enhancers | Primary T helper naive cells fromperipheralblood | blood |
| 29 | chr5:43553600-43555400 | Genic enhancers | Brain Inferior Temporal Lobe | brain |
| 30 | chr5:43553600-43556000 | Transcr. at gene 5' and 3' | iPS-20b Cell Line | embryonic stem cell |
| 31 | chr5:43553800-43555200 | Enhancers | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 32 | chr5:43553800-43555400 | Genic enhancers | Osteobl | bone |
| 33 | chr5:43553800-43555600 | Genic enhancers | Primary hematopoietic stem cells | blood |
| 34 | chr5:43553800-43555800 | Enhancers | Brain Hippocampus Middle | brain |
| 35 | chr5:43553800-43556000 | Enhancers | Primary mononuclear cells fromperipheralblood | Blood |
| 36 | chr5:43553800-43556000 | Enhancers | Skeletal Muscle Male | skeletal muscle |
| 37 | chr5:43554000-43555200 | Genic enhancers | HMEC | breast |
| 38 | chr5:43554000-43555400 | Transcr. at gene 5' and 3' | NHEK | skin |
| 39 | chr5:43554000-43555800 | Enhancers | Fetal Intestine Small | intestine |
| 40 | chr5:43554000-43556000 | Transcr. at gene 5' and 3' | HUES64 Cell Line | embryonic stem cell |
| 41 | chr5:43554000-43557800 | Active TSS | Right Ventricle | heart |
| 42 | chr5:43554200-43555200 | Enhancers | iPS-15b Cell Line | embryonic stem cell |
| 43 | chr5:43554200-43555200 | Active TSS | Stomach Smooth Muscle | stomach |
| 44 | chr5:43554200-43555400 | Genic enhancers | Brain Cingulate Gyrus | brain |
| 45 | chr5:43554200-43555400 | Genic enhancers | Fetal Adrenal Gland | Adrenal Gland |
| 46 | chr5:43554200-43555400 | Transcr. at gene 5' and 3' | Fetal Brain Female | brain |
| 47 | chr5:43554200-43555800 | Genic enhancers | Skeletal Muscle Female | skeletal muscle |
| 48 | chr5:43554200-43556200 | Enhancers | Stomach Mucosa | stomach |
| 49 | chr5:43554400-43555200 | Genic enhancers | H1 Cell Line | embryonic stem cell |
| 50 | chr5:43554400-43555400 | Transcr. at gene 5' and 3' | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
