Variant report

Variant rs3776423
Chromosome Location chr5:43487874-43487875
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:84 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:43484800-43498000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
2 chr5:43484800-43502800 Weak transcription H1 Cell Line embryonic stem cell
3 chr5:43484800-43502800 Weak transcription H9 Cell Line embryonic stem cell
4 chr5:43484800-43502800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
5 chr5:43484800-43502800 Weak transcription Fetal Muscle Trunk muscle
6 chr5:43484800-43505600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
7 chr5:43484800-43511000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
8 chr5:43484800-43514000 Weak transcription ES-WA7 Cell Line embryonic stem cell
9 chr5:43484800-43514600 Weak transcription Ovary ovary
10 chr5:43484800-43514800 Weak transcription Spleen Spleen
11 chr5:43485000-43488200 Weak transcription HUES48 Cell Line embryonic stem cell
12 chr5:43485000-43488200 Weak transcription Breast Myoepithelial Primary Cells Breast
13 chr5:43485000-43488400 Weak transcription HUES6 Cell Line embryonic stem cell
14 chr5:43485000-43497800 Weak transcription Placenta Placenta
15 chr5:43485000-43501000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
16 chr5:43485000-43501000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
17 chr5:43485000-43502600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
18 chr5:43485000-43503000 Weak transcription NHEK skin
19 chr5:43485000-43503400 Weak transcription Brain Germinal Matrix brain
20 chr5:43485000-43504600 Weak transcription Fetal Muscle Leg muscle
21 chr5:43485000-43505000 Weak transcription ES-I3 Cell Line embryonic stem cell
22 chr5:43485000-43513400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
23 chr5:43485000-43513800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
24 chr5:43485000-43514200 Weak transcription Sigmoid Colon Sigmoid Colon
25 chr5:43485200-43488000 Weak transcription iPS-20b Cell Line embryonic stem cell
26 chr5:43485200-43488200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
27 chr5:43485200-43488200 Weak transcription HUVEC blood vessel
28 chr5:43485200-43488800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
29 chr5:43485200-43489200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
30 chr5:43485200-43489400 Weak transcription iPS-18 Cell Line embryonic stem cell
31 chr5:43485200-43490200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
32 chr5:43485200-43502800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
33 chr5:43485200-43505400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
34 chr5:43485200-43505400 Weak transcription Fetal Intestine Large intestine
35 chr5:43485200-43505400 Weak transcription Fetal Stomach stomach
36 chr5:43485200-43506000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
37 chr5:43485200-43506000 Weak transcription Adipose Nuclei Adipose
38 chr5:43485200-43513200 Weak transcription NHDF-Ad bronchial
39 chr5:43485200-43513200 Weak transcription NHLF lung
40 chr5:43485200-43513400 Weak transcription iPS-15b Cell Line embryonic stem cell
41 chr5:43485200-43513400 Weak transcription Fetal Lung lung
42 chr5:43485200-43513600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
43 chr5:43485200-43513600 Weak transcription Fetal Intestine Small intestine
44 chr5:43485200-43513600 Weak transcription HSMM muscle
45 chr5:43485200-43513600 Weak transcription NH-A brain
46 chr5:43485200-43514200 Weak transcription Duodenum Smooth Muscle Duodenum
47 chr5:43485400-43495800 Weak transcription Colon Smooth Muscle Colon
48 chr5:43485400-43501200 Weak transcription A549 lung
49 chr5:43485400-43502800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
50 chr5:43485400-43505400 Weak transcription Cortex derived primary cultured neurospheres brain

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