The 2.0 version of rSNPBase

Variant report

Variant rs7719881
Chromosome Location chr5:147758534-147758535
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:56 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:147729200-147762200 Weak transcription Aorta Aorta
2 chr5:147747800-147762400 Weak transcription Ovary ovary
3 chr5:147749800-147762200 Weak transcription Adipose Nuclei Adipose
4 chr5:147750000-147762400 Weak transcription Brain Substantia Nigra brain
5 chr5:147751200-147761800 Weak transcription Fetal Brain Male brain
6 chr5:147751400-147763000 Weak transcription Esophagus oesophagus
7 chr5:147751800-147762400 Weak transcription Skeletal Muscle Male skeletal muscle
8 chr5:147752200-147760800 Weak transcription Fetal Lung lung
9 chr5:147752600-147761000 Weak transcription Brain Germinal Matrix brain
10 chr5:147752600-147762200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
11 chr5:147752600-147762600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
12 chr5:147752800-147762600 Weak transcription Sigmoid Colon Sigmoid Colon
13 chr5:147752800-147762800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
14 chr5:147753200-147762200 Weak transcription Rectal Mucosa Donor 31 rectum
15 chr5:147754400-147762200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
16 chr5:147754400-147762200 Weak transcription Brain Cingulate Gyrus brain
17 chr5:147754400-147762400 Weak transcription iPS-18 Cell Line embryonic stem cell
18 chr5:147754600-147762400 Weak transcription Stomach Mucosa stomach
19 chr5:147754800-147762400 Weak transcription Fetal Intestine Large intestine
20 chr5:147755000-147762000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
21 chr5:147755000-147762200 Weak transcription Primary T helper cells fromperipheralblood blood
22 chr5:147755200-147758600 Weak transcription Primary T cells from cord blood blood
23 chr5:147755400-147762000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
24 chr5:147755400-147762400 Weak transcription Fetal Stomach stomach
25 chr5:147755400-147762400 Weak transcription Stomach Smooth Muscle stomach
26 chr5:147755400-147762600 Weak transcription Fetal Muscle Trunk muscle
27 chr5:147755600-147761600 Weak transcription Right Atrium heart
28 chr5:147755600-147762400 Weak transcription Pancreas Pancrea
29 chr5:147755600-147763000 Weak transcription Lung lung
30 chr5:147755800-147762400 Weak transcription Fetal Muscle Leg muscle
31 chr5:147756000-147762600 Weak transcription Right Ventricle heart
32 chr5:147756200-147762200 Weak transcription Fetal Adrenal Gland Adrenal Gland
33 chr5:147756600-147762800 Weak transcription ES-WA7 Cell Line embryonic stem cell
34 chr5:147757000-147760800 Weak transcription Cortex derived primary cultured neurospheres brain
35 chr5:147757000-147763200 Weak transcription Gastric stomach
36 chr5:147757400-147758600 Strong transcription Left Ventricle heart
37 chr5:147757400-147762000 Enhancers HUVEC blood vessel
38 chr5:147757800-147758800 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
39 chr5:147757800-147758800 Weak transcription Fetal Heart heart
40 chr5:147757800-147761000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
41 chr5:147757800-147762400 Weak transcription Skeletal Muscle Female skeletal muscle
42 chr5:147758000-147758600 ZNF genes & repeats Primary B cells from cord blood blood
43 chr5:147758000-147758800 ZNF genes & repeats hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
44 chr5:147758200-147759000 Enhancers Primary T helper naive cells fromperipheralblood blood
45 chr5:147758200-147761000 Weak transcription Breast Myoepithelial Primary Cells Breast
46 chr5:147758200-147761600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
47 chr5:147758200-147761600 Weak transcription Brain Inferior Temporal Lobe brain
48 chr5:147758200-147762000 Weak transcription Liver Liver
49 chr5:147758400-147759200 Weak transcription Primary T helper cells PMA-I stimulated --
50 chr5:147758400-147760400 Weak transcription Fetal Brain Female brain

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Last update: Aug 31, 2015