Variant report

(count:14 , 50 per page) page: 1

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	GATA3	chr5:43413959-43414622	T-47D	breast:	n/a	n/a
2	ESR1	chr5:43413889-43414584	T-47D	breast:	n/a	n/a
3	CTCF	chr5:43414220-43414370	Hela-S3	cervix:	n/a	n/a
4	FOXA1	chr5:43414078-43414501	T-47D	breast:	n/a	n/a
5	EP300	chr5:43414020-43414526	T-47D	breast:	n/a	n/a
6	EP300	chr5:43413892-43414596	T-47D	breast:	n/a	n/a
7	FOXA1	chr5:43413936-43414489	T-47D	breast:	n/a	n/a
8	CTCF	chr5:43414260-43414410	NHEK	skin:	n/a	n/a
9	ESR1	chr5:43413939-43414559	T-47D	breast:	n/a	n/a
10	ESR1	chr5:43413920-43414478	T-47D	breast:	n/a	n/a
11	GATA3	chr5:43414012-43414596	T-47D	breast:	n/a	n/a
12	ESR1	chr5:43413856-43414565	T-47D	breast:	n/a	n/a
13	ESR1	chr5:43414021-43414537	T-47D	breast:	n/a	n/a
14	ESR1	chr5:43414040-43414498	T-47D	breast:	n/a	n/a

No data

(count:6 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr5:43408350..43414682-chr5:43482713..43485961,9	MCF-7	breast:
2	chr5:43395706..43398028-chr5:43412212..43414366,2	MCF-7	breast:
3	chr5:43410262..43414589-chr5:43481541..43486559,6	K562	blood:
4	chr5:43410322..43414589-chr5:43481701..43485572,7	K562	blood:
5	chr5:43414209..43417437-chr5:43419319..43422239,3	K562	blood:
6	chr5:43413385..43415029-chr5:43421683..43423950,2	MCF-7	breast:

No data

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs10066349	0.90[AFR][1000 genomes];0.81[AMR][1000 genomes]
rs10069318	0.85[AFR][1000 genomes]
rs16873315	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs16873319	0.82[AFR][1000 genomes]
rs34388270	0.85[AFR][1000 genomes]
rs34685576	0.82[AFR][1000 genomes]
rs35929451	0.90[AFR][1000 genomes]
rs4264950	0.90[AFR][1000 genomes]
rs4438885	0.98[AFR][1000 genomes];0.81[AMR][1000 genomes]
rs4498257	0.85[AFR][1000 genomes]
rs4529199	0.86[AFR][1000 genomes]
rs4554231	0.91[AFR][1000 genomes]
rs4616901	0.84[AFR][1000 genomes]
rs56729517	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6451691	0.84[AMR][1000 genomes]
rs6862604	0.87[EUR][1000 genomes]
rs6886399	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6889653	0.86[AFR][1000 genomes]
rs7720858	0.90[AFR][1000 genomes]
rs7736174	0.90[AFR][1000 genomes]

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:43402200-43420200	Weak transcription	Gastric	stomach
2	chr5:43410200-43414800	Enhancers	Placenta	Placenta
3	chr5:43411200-43418200	Weak transcription	Sigmoid Colon	Sigmoid Colon
4	chr5:43412600-43414600	Enhancers	Stomach Mucosa	stomach
5	chr5:43412600-43420400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
6	chr5:43412600-43421600	Weak transcription	Pancreas	Pancrea
7	chr5:43413200-43415800	Weak transcription	Hela-S3	cervix
8	chr5:43413400-43416800	Weak transcription	Duodenum Mucosa	Duodenum
9	chr5:43413800-43416200	Weak transcription	Fetal Intestine Small	intestine
10	chr5:43413800-43416800	Weak transcription	Rectal Mucosa Donor 31	rectum
11	chr5:43414200-43414600	Enhancers	K562	blood

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