Variant report

Variant	rs34685576
Chromosome Location	chr5:43414744-43414745
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr5:43414418..43419410-chr5:43420621..43423728,9	MCF-7	breast:
2	chr5:43414209..43417437-chr5:43419319..43422239,3	K562	blood:
3	chr5:43413385..43415029-chr5:43421683..43423950,2	MCF-7	breast:

Extended variants
information (count: 33 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:33)

rs_ID	r²[population]
rs10066349	0.89[AFR][1000 genomes];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10069318	0.86[AFR][1000 genomes];0.89[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs12656248	0.98[ASN][1000 genomes]
rs13159247	1.00[ASN][1000 genomes]
rs13160431	0.98[ASN][1000 genomes]
rs13167785	1.00[ASN][1000 genomes]
rs13167974	1.00[ASN][1000 genomes]
rs13190188	1.00[ASN][1000 genomes]
rs16873315	0.84[AFR][1000 genomes]
rs16873319	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34057521	1.00[ASN][1000 genomes]
rs34087297	0.98[ASN][1000 genomes]
rs34181466	1.00[ASN][1000 genomes]
rs34353246	0.93[ASN][1000 genomes]
rs34388270	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35141306	1.00[ASN][1000 genomes]
rs35929451	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4264950	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4438885	0.84[AFR][1000 genomes];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4498257	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4529199	0.98[ASN][1000 genomes]
rs4554231	1.00[ASN][1000 genomes]
rs56729517	0.82[AFR][1000 genomes]
rs6886399	0.84[AFR][1000 genomes]
rs6889653	0.85[AFR][1000 genomes];0.82[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs6890108	0.87[ASN][1000 genomes]
rs71629168	1.00[ASN][1000 genomes]
rs71629169	0.98[ASN][1000 genomes]
rs7713529	0.98[ASN][1000 genomes]
rs7720858	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7731345	0.82[AFR][1000 genomes]
rs7736173	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7736174	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:43402200-43420200	Weak transcription	Gastric	stomach
2	chr5:43410200-43414800	Enhancers	Placenta	Placenta
3	chr5:43411200-43418200	Weak transcription	Sigmoid Colon	Sigmoid Colon
4	chr5:43412600-43420400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
5	chr5:43412600-43421600	Weak transcription	Pancreas	Pancrea
6	chr5:43413200-43415800	Weak transcription	Hela-S3	cervix
7	chr5:43413400-43416800	Weak transcription	Duodenum Mucosa	Duodenum
8	chr5:43413800-43416200	Weak transcription	Fetal Intestine Small	intestine
9	chr5:43413800-43416800	Weak transcription	Rectal Mucosa Donor 31	rectum
10	chr5:43414600-43415800	Weak transcription	K562	blood
11	chr5:43414600-43416400	Weak transcription	Stomach Mucosa	stomach

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