Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:121709220..121710801-chr6:121713235..121715592,2	K562	blood:
2	chr6:121709206..121710801-chr6:121713235..121716554,3	K562	blood:

Variant related genes	Relation type
ENSG00000272714	Chromatin interaction

rSNPs within LD-proxies of this variant (count:26)

rs_ID	r²[population]
rs12526300	0.88[ASN][1000 genomes]
rs12528003	0.89[ASN][1000 genomes]
rs12529908	0.83[AFR][1000 genomes];0.82[AMR][1000 genomes];0.98[ASN][1000 genomes]
rs1925222	0.87[ASN][1000 genomes]
rs2038836	0.89[ASN][1000 genomes]
rs2147709	0.81[EUR][1000 genomes]
rs4376375	0.87[ASN][1000 genomes]
rs4551206	0.86[ASN][1000 genomes]
rs4945685	0.84[AFR][1000 genomes];0.83[AMR][1000 genomes];0.93[ASN][1000 genomes]
rs4945686	0.93[ASN][1000 genomes]
rs4946568	0.89[ASN][1000 genomes]
rs5012746	0.90[ASN][1000 genomes]
rs66584012	0.87[ASN][1000 genomes]
rs67127305	0.85[ASN][1000 genomes]
rs67418017	0.90[ASN][1000 genomes]
rs67502032	0.87[ASN][1000 genomes]
rs68096413	0.87[ASN][1000 genomes]
rs6908897	0.93[ASN][1000 genomes]
rs6913498	0.89[ASN][1000 genomes]
rs6930098	0.87[ASN][1000 genomes]
rs7767249	0.88[ASN][1000 genomes]
rs7775464	0.83[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs7775586	0.80[AFR][1000 genomes];0.85[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs9401398	0.86[ASN][1000 genomes]
rs9482157	0.87[ASN][1000 genomes]
rs9490232	0.83[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv530527	chr6:121298528-121789855	ZNF genes & repeats Enhancers Weak transcription Strong transcription Bivalent Enhancer Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	10 gene(s)	inside rSNPs	diseases
2	nsv830789	chr6:121581450-121732320	Weak transcription Flanking Active TSS Enhancers Active TSS Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:121713200-121715200	Enhancers	Fetal Intestine Small	intestine
2	chr6:121714200-121717000	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
3	chr6:121714800-121717000	Weak transcription	Fetal Intestine Large	intestine

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