Variant report

Variant	rs7740837
Chromosome Location	chr6:73637113-73637114
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:73635330..73637431-chr6:73640282..73642642,2	K562	blood:

Extended variants
information (count: 36 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:34)

rs_ID	r²[population]
rs10805969	0.82[AMR][1000 genomes]
rs11756197	0.83[AMR][1000 genomes]
rs1316784	1.00[CEU][hapmap];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1342337	1.00[CEU][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17800259	0.83[AMR][1000 genomes]
rs1935526	1.00[CEU][hapmap];0.94[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs1935527	1.00[CEU][hapmap];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2882328	1.00[CEU][hapmap];0.94[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs4388257	0.84[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs4552693	1.00[CEU][hapmap];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6908756	0.82[AMR][1000 genomes]
rs6909147	0.87[AMR][1000 genomes]
rs6909225	0.85[AMR][1000 genomes]
rs6909241	0.83[AMR][1000 genomes]
rs6913925	0.87[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs6915633	0.87[AMR][1000 genomes]
rs6924280	1.00[CEU][hapmap];0.94[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs6929515	0.95[CEU][hapmap];0.93[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs6930157	0.82[AMR][1000 genomes]
rs71573567	0.87[AMR][1000 genomes]
rs9341390	1.00[CEU][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9342986	0.96[CEU][hapmap];0.92[EUR][1000 genomes]
rs9342987	1.00[CEU][hapmap];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9351954	0.88[AMR][1000 genomes]
rs9351955	0.93[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs9351956	1.00[CEU][hapmap];0.93[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs9360610	0.83[AMR][1000 genomes]
rs9360611	0.83[AMR][1000 genomes]
rs9360612	0.84[CEU][hapmap];0.85[AMR][1000 genomes]
rs9360614	0.85[AMR][1000 genomes]
rs9360616	0.88[CEU][hapmap];0.83[AMR][1000 genomes]
rs9360617	0.88[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs9360618	1.00[CEU][hapmap];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9360619	0.93[AMR][1000 genomes];0.94[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv830691	chr6:73530978-73743648	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Strong transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA	3 gene(s)	inside rSNPs	diseases
2	nsv886155	chr6:73551937-73649330	Enhancers Weak transcription Flanking Active TSS Strong transcription ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:73607600-73715400	Weak transcription	Primary B cells from cord blood	blood
2	chr6:73624600-73637200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
3	chr6:73624600-73641400	Weak transcription	Psoas Muscle	Psoas
4	chr6:73624600-73658600	Weak transcription	Primary hematopoietic stem cells short term culture	blood
5	chr6:73630000-73648400	Weak transcription	Aorta	Aorta
6	chr6:73635600-73641200	Weak transcription	Fetal Heart	heart
7	chr6:73636600-73637600	Enhancers	Muscle Satellite Cultured Cells	--
8	chr6:73636800-73638000	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
9	chr6:73636800-73638000	Enhancers	Fetal Lung	lung

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