Variant report

rSNPs within LD-proxies of this variant (count:30)

rs_ID	r²[population]
rs10755687	0.83[ASN][1000 genomes]
rs10807150	0.82[ASN][1000 genomes]
rs12211943	0.83[ASN][1000 genomes]
rs1557567	0.82[ASN][1000 genomes]
rs1557568	0.82[ASN][1000 genomes]
rs2071920	0.82[ASN][1000 genomes]
rs2267657	0.81[ASN][1000 genomes]
rs2284196	0.81[AMR][1000 genomes]
rs2395614	0.81[ASN][1000 genomes]
rs3777742	0.82[ASN][1000 genomes]
rs3777744	0.81[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs4713850	0.83[ASN][1000 genomes]
rs4713853	0.81[AMR][1000 genomes];0.80[ASN][1000 genomes]
rs6457812	0.82[ASN][1000 genomes]
rs6906987	0.81[ASN][1000 genomes]
rs6907364	0.82[ASN][1000 genomes]
rs6913475	0.90[AMR][1000 genomes];0.82[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs6920432	0.87[AMR][1000 genomes];0.80[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs6930562	0.92[AMR][1000 genomes]
rs6941471	0.84[ASN][1000 genomes]
rs7757316	0.84[AMR][1000 genomes];0.82[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs7772302	0.87[AMR][1000 genomes];0.80[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs8205	0.82[ASN][1000 genomes]
rs9366882	0.82[ASN][1000 genomes]
rs9469972	0.82[ASN][1000 genomes]
rs9469975	0.82[ASN][1000 genomes]
rs9469982	0.82[ASN][1000 genomes]
rs9469997	0.83[ASN][1000 genomes]
rs9469998	0.87[AMR][1000 genomes];0.84[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs965272	0.82[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv830641	chr6:35282534-35440603	Enhancers Weak transcription Flanking Active TSS Genic enhancers Strong transcription Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	57 gene(s)	inside rSNPs	diseases
2	nsv602907	chr6:35285720-35312267	Strong transcription Active TSS Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Weak transcription Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:35286600-35310000	Weak transcription	Right Atrium	heart
2	chr6:35291600-35309600	Weak transcription	Dnd41	blood
3	chr6:35293200-35309600	Weak transcription	Breast Myoepithelial Primary Cells	Breast
4	chr6:35296000-35303000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
5	chr6:35300400-35308800	Weak transcription	Placenta	Placenta
6	chr6:35300600-35309800	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
7	chr6:35300800-35309600	Weak transcription	Primary T helper cells PMA-I stimulated	--
8	chr6:35300800-35309800	Weak transcription	Primary T helper naive cells from peripheral blood	blood
9	chr6:35301000-35304600	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood

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