The 2.0 version of rSNPBase

Variant report

Variant rs3777742
Chromosome Location chr6:35238154-35238155
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:90 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:35228200-35243000 Weak transcription Aorta Aorta
2 chr6:35228400-35247800 Weak transcription Fetal Muscle Trunk muscle
3 chr6:35228400-35248000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
4 chr6:35228400-35250200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr6:35228600-35242000 Weak transcription HSMMtube muscle
6 chr6:35228600-35243000 Weak transcription HSMM muscle
7 chr6:35228600-35243000 Weak transcription NH-A brain
8 chr6:35228600-35248400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
9 chr6:35228600-35248800 Weak transcription Rectal Mucosa Donor 31 rectum
10 chr6:35228600-35253200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
11 chr6:35228800-35238800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
12 chr6:35228800-35242400 Weak transcription Cortex derived primary cultured neurospheres brain
13 chr6:35228800-35242400 Weak transcription NHEK skin
14 chr6:35228800-35243200 Weak transcription Primary neutrophils fromperipheralblood blood
15 chr6:35228800-35244000 Weak transcription Primary hematopoietic stem cells short term culture blood
16 chr6:35228800-35248800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
17 chr6:35228800-35248800 Weak transcription Spleen Spleen
18 chr6:35228800-35249000 Weak transcription Fetal Intestine Large intestine
19 chr6:35228800-35249000 Weak transcription Rectal Mucosa Donor 29 rectum
20 chr6:35228800-35251400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
21 chr6:35229000-35241800 Weak transcription Brain Cingulate Gyrus brain
22 chr6:35229000-35242000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
23 chr6:35229000-35242400 Weak transcription Stomach Smooth Muscle stomach
24 chr6:35229000-35243000 Weak transcription Sigmoid Colon Sigmoid Colon
25 chr6:35229000-35248800 Weak transcription Duodenum Mucosa Duodenum
26 chr6:35229000-35248800 Weak transcription Thymus Thymus
27 chr6:35229000-35249000 Weak transcription Liver Liver
28 chr6:35229000-35250400 Weak transcription Fetal Brain Male brain
29 chr6:35229200-35238200 Weak transcription Primary T cells from cord blood blood
30 chr6:35229200-35243000 Weak transcription Adipose Nuclei Adipose
31 chr6:35229200-35246200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
32 chr6:35229200-35248800 Weak transcription Primary T helper naive cells from peripheral blood blood
33 chr6:35229200-35248800 Weak transcription Dnd41 blood
34 chr6:35229200-35250200 Weak transcription Pancreas Pancrea
35 chr6:35230600-35242200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
36 chr6:35230800-35240600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
37 chr6:35230800-35241400 Weak transcription NHLF lung
38 chr6:35230800-35241800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
39 chr6:35230800-35242600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
40 chr6:35230800-35242800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
41 chr6:35231000-35240400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
42 chr6:35231000-35241600 Weak transcription Muscle Satellite Cultured Cells --
43 chr6:35231200-35243000 Weak transcription Placenta Placenta
44 chr6:35231200-35248400 Weak transcription Primary T cells fromperipheralblood blood
45 chr6:35231600-35242200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
46 chr6:35232200-35248600 Weak transcription Monocytes-CD14+_RO01746 blood
47 chr6:35232200-35248800 Weak transcription Primary T helper naive cells fromperipheralblood blood
48 chr6:35232400-35239600 Weak transcription Primary monocytes fromperipheralblood blood
49 chr6:35232400-35248800 Weak transcription Primary T helper cells fromperipheralblood blood
50 chr6:35232400-35250200 Weak transcription Primary hematopoietic stem cells blood

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Last update: Aug 31, 2015