The 2.0 version of rSNPBase

Variant report

Variant rs1013907
Chromosome Location chr6:35201858-35201859
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:71 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:35182400-35209000 Weak transcription A549 lung
2 chr6:35184800-35205600 Weak transcription Fetal Brain Female brain
3 chr6:35186200-35202800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
4 chr6:35186400-35212000 Weak transcription NHDF-Ad bronchial
5 chr6:35186600-35204600 Weak transcription Placenta Amnion Placenta Amnion
6 chr6:35186600-35205400 Weak transcription Fetal Muscle Trunk muscle
7 chr6:35186800-35212000 Weak transcription Dnd41 blood
8 chr6:35188200-35205800 Weak transcription Fetal Kidney kidney
9 chr6:35188200-35206400 Weak transcription NH-A brain
10 chr6:35189600-35205800 Weak transcription Brain Germinal Matrix brain
11 chr6:35190000-35205600 Weak transcription Fetal Muscle Leg muscle
12 chr6:35190200-35212000 Weak transcription Brain Angular Gyrus brain
13 chr6:35191200-35212000 Weak transcription Primary T cells from cord blood blood
14 chr6:35191400-35226000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
15 chr6:35192200-35211400 Weak transcription Skeletal Muscle Female skeletal muscle
16 chr6:35194000-35209400 Weak transcription Thymus Thymus
17 chr6:35194000-35225600 Weak transcription Primary B cells from cord blood blood
18 chr6:35194200-35202600 Weak transcription HUES64 Cell Line embryonic stem cell
19 chr6:35194800-35202800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
20 chr6:35195600-35210600 Weak transcription Spleen Spleen
21 chr6:35195800-35202400 Weak transcription Fetal Intestine Small intestine
22 chr6:35197000-35205600 Weak transcription Breast Myoepithelial Primary Cells Breast
23 chr6:35198400-35202000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
24 chr6:35199200-35202600 Weak transcription HSMMtube muscle
25 chr6:35199200-35211800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
26 chr6:35199200-35212200 Weak transcription Brain Inferior Temporal Lobe brain
27 chr6:35199400-35208800 Weak transcription Brain Cingulate Gyrus brain
28 chr6:35199400-35209200 Weak transcription Adipose Nuclei Adipose
29 chr6:35199400-35211800 Weak transcription Brain Hippocampus Middle brain
30 chr6:35199400-35212000 Weak transcription Brain Anterior Caudate brain
31 chr6:35199400-35216200 Weak transcription Brain Substantia Nigra brain
32 chr6:35199600-35202400 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
33 chr6:35199600-35203000 Weak transcription Fetal Adrenal Gland Adrenal Gland
34 chr6:35199600-35203000 Strong transcription Fetal Stomach stomach
35 chr6:35199600-35204000 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
36 chr6:35199600-35205400 Weak transcription Rectal Smooth Muscle rectum
37 chr6:35199600-35209800 Weak transcription Gastric stomach
38 chr6:35199600-35210400 Weak transcription Skeletal Muscle Male skeletal muscle
39 chr6:35199600-35211200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
40 chr6:35199600-35215600 Weak transcription Hela-S3 cervix
41 chr6:35199600-35226600 Weak transcription Esophagus oesophagus
42 chr6:35199800-35202200 Weak transcription Colon Smooth Muscle Colon
43 chr6:35199800-35205600 Weak transcription Duodenum Smooth Muscle Duodenum
44 chr6:35199800-35205600 Weak transcription Right Atrium heart
45 chr6:35199800-35205600 Weak transcription Stomach Smooth Muscle stomach
46 chr6:35199800-35206200 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
47 chr6:35199800-35206800 Weak transcription Ovary ovary
48 chr6:35199800-35212200 Weak transcription HepG2 liver
49 chr6:35199800-35226200 Weak transcription Pancreas Pancrea
50 chr6:35200000-35202400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived

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Last update: Aug 31, 2015