The 2.0 version of rSNPBase

Variant report

Variant rs9380502
Chromosome Location chr6:35281911-35281912
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:63 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:35265200-35285600 Weak transcription Brain Substantia Nigra brain
2 chr6:35271400-35285000 Weak transcription HepG2 liver
3 chr6:35271600-35285200 Weak transcription Fetal Intestine Large intestine
4 chr6:35271600-35285600 Weak transcription Placenta Amnion Placenta Amnion
5 chr6:35272400-35284600 Weak transcription HMEC breast
6 chr6:35272400-35285400 Weak transcription Gastric stomach
7 chr6:35276000-35293800 Weak transcription K562 blood
8 chr6:35277000-35285400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr6:35278200-35285600 Weak transcription Colonic Mucosa Colon
10 chr6:35278600-35285400 Weak transcription Pancreas Pancrea
11 chr6:35279000-35285400 Weak transcription Esophagus oesophagus
12 chr6:35279000-35285600 Weak transcription Sigmoid Colon Sigmoid Colon
13 chr6:35279200-35282600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
14 chr6:35279400-35285400 Weak transcription Right Atrium heart
15 chr6:35279600-35282000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
16 chr6:35279800-35282000 Genic enhancers Primary monocytes fromperipheralblood blood
17 chr6:35279800-35282000 Genic enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
18 chr6:35280000-35285200 Weak transcription Skeletal Muscle Female skeletal muscle
19 chr6:35280000-35285400 Weak transcription Rectal Smooth Muscle rectum
20 chr6:35280200-35282000 Genic enhancers Monocytes-CD14+_RO01746 blood
21 chr6:35280200-35283000 Enhancers Primary T helper memory cells from peripheral blood 1 blood
22 chr6:35280200-35285200 Weak transcription Duodenum Smooth Muscle Duodenum
23 chr6:35280200-35285400 Weak transcription Left Ventricle heart
24 chr6:35280200-35285600 Genic enhancers Primary T helper memory cells from peripheral blood 2 blood
25 chr6:35280200-35285600 Weak transcription Rectal Mucosa Donor 31 rectum
26 chr6:35280400-35282000 Genic enhancers Primary T cells fromperipheralblood blood
27 chr6:35280400-35282000 Genic enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
28 chr6:35280400-35283200 Enhancers Primary T killer naive cells fromperipheralblood blood
29 chr6:35280400-35285000 Genic enhancers Primary T helper cells fromperipheralblood blood
30 chr6:35280400-35285400 Weak transcription Fetal Stomach stomach
31 chr6:35280600-35282000 Genic enhancers Primary neutrophils fromperipheralblood blood
32 chr6:35280600-35282000 Enhancers Primary T helper 17 cells PMA-I stimulated --
33 chr6:35280600-35283000 Enhancers Primary T cells from cord blood blood
34 chr6:35280600-35283000 Genic enhancers Primary T helper cells PMA-I stimulated --
35 chr6:35280600-35284000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
36 chr6:35280600-35285000 Weak transcription Spleen Spleen
37 chr6:35280600-35285200 Weak transcription Fetal Intestine Small intestine
38 chr6:35280600-35285200 Weak transcription Placenta Placenta
39 chr6:35280600-35285400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
40 chr6:35280600-35285400 Weak transcription Liver Liver
41 chr6:35280600-35285600 Weak transcription Lung lung
42 chr6:35280800-35283000 Enhancers Primary T helper naive cells from peripheral blood blood
43 chr6:35280800-35283000 Enhancers Primary T killer memory cells from peripheral blood blood
44 chr6:35280800-35284200 Weak transcription GM12878-XiMat blood
45 chr6:35280800-35285000 Weak transcription Rectal Mucosa Donor 29 rectum
46 chr6:35280800-35285200 Weak transcription Duodenum Mucosa Duodenum
47 chr6:35280800-35285200 Weak transcription Thymus Thymus
48 chr6:35280800-35285400 Weak transcription Adipose Nuclei Adipose
49 chr6:35280800-35285600 Strong transcription Fetal Thymus thymus
50 chr6:35280800-35293200 Strong transcription Primary Natural Killer cells fromperipheralblood blood

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015