Variant report

Variant	rs9368854
Chromosome Location	chr6:35181236-35181237
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	POLR2A	chr6:35181028-35182507	H1-neurons	neurons:	n/a	n/a
2	MAX	chr6:35181193-35182456	H1-hESC	embryonic stem cell:	n/a	chr6:35181443-35181452 chr6:35181919-35181929 chr6:35181439-35181448
3	CTBP2	chr6:35181103-35182305	H1-hESC	embryonic stem cell:	n/a	n/a
4	SIN3AK20	chr6:35181215-35182090	H1-hESC	embryonic stem cell:	n/a	n/a
5	TBP	chr6:35181187-35181491	H1-hESC	embryonic stem cell:	n/a	n/a
6	TAF1	chr6:35181047-35182112	H1-neurons	neurons:	n/a	n/a
7	REST	chr6:35180725-35183005	H1-neurons	neurons:	n/a	chr6:35182310-35182323 chr6:35182307-35182327 chr6:35181895-35181908 chr6:35182415-35182428 chr6:35180964-35180974 chr6:35181102-35181115 chr6:35182307-35182327 chr6:35182371-35182384 chr6:35181504-35181517
8	POLR2A	chr6:35181072-35182512	H1-neurons	neurons:	n/a	n/a
9	POLR2A	chr6:35181108-35181305	MCF-7	breast:	n/a	n/a
10	TAF1	chr6:35181177-35182038	H1-neurons	neurons:	n/a	n/a
11	SIN3A	chr6:35180939-35182758	H1-hESC	embryonic stem cell:	n/a	chr6:35180965-35180974 chr6:35182362-35182371 chr6:35182415-35182428 chr6:35182169-35182180 chr6:35182477-35182488 chr6:35182307-35182320

No.	Distal block	Cell Line	Cell type
1	chr6:35177824..35181731-chr6:35185438..35190079,5	K562	blood:
2	chr6:35172932..35174925-chr6:35178829..35181429,2	K562	blood:
3	chr6:35178562..35181407-chr6:35198838..35201388,2	MCF-7	breast:

Variant related genes	Relation type
SCUBE3	TF binding region

Extended variants
information (count: 134 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:131)

rs_ID	r²[population]
rs10080361	0.94[CHB][hapmap];0.95[JPT][hapmap];0.91[ASN][1000 genomes]
rs1013907	0.94[ASN][1000 genomes]
rs1034449	1.00[MKK][hapmap]
rs10755687	0.89[CHD][hapmap];0.82[JPT][hapmap]
rs10807150	0.89[CHD][hapmap];0.82[JPT][hapmap];0.82[ASN][1000 genomes]
rs10947540	0.94[CHB][hapmap];0.94[CHD][hapmap];1.00[JPT][hapmap];0.91[ASN][1000 genomes]
rs1108709	0.85[ASN][1000 genomes]
rs1194	0.94[CHB][hapmap];0.97[CHD][hapmap];1.00[JPT][hapmap];0.92[ASN][1000 genomes]
rs12173347	1.00[CEU][hapmap];1.00[YRI][hapmap];0.81[AFR][1000 genomes];0.89[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs12173582	1.00[ASW][hapmap];1.00[CEU][hapmap];0.97[CHD][hapmap];0.91[GIH][hapmap];0.95[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.81[AFR][1000 genomes];0.89[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs12211765	1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12211943	0.81[ASN][1000 genomes]
rs13214290	0.94[CHB][hapmap];0.94[CHD][hapmap];1.00[JPT][hapmap];0.93[ASN][1000 genomes]
rs1557567	0.89[CHD][hapmap];0.82[JPT][hapmap];0.82[ASN][1000 genomes]
rs1557568	0.89[CHD][hapmap];0.82[JPT][hapmap];0.82[ASN][1000 genomes]
rs1590381	0.83[ASN][1000 genomes]
rs16872484	0.82[AFR][1000 genomes]
rs1888822	0.83[CHD][hapmap];0.90[JPT][hapmap];0.84[ASN][1000 genomes]
rs1888823	0.94[CHB][hapmap];0.97[CHD][hapmap];1.00[JPT][hapmap];0.92[ASN][1000 genomes]
rs1888824	0.94[CHB][hapmap];0.94[CHD][hapmap];1.00[JPT][hapmap];0.91[ASN][1000 genomes]
rs1888825	0.94[CHB][hapmap];0.94[CHD][hapmap];1.00[JPT][hapmap];0.91[ASN][1000 genomes]
rs1894650	0.94[CHB][hapmap];1.00[JPT][hapmap];0.91[ASN][1000 genomes]
rs1894651	0.82[CHB][hapmap];1.00[JPT][hapmap];0.92[ASN][1000 genomes]
rs1894652	1.00[AFR][1000 genomes];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1894653	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1929847	0.94[CHB][hapmap];0.97[CHD][hapmap];1.00[JPT][hapmap];0.92[ASN][1000 genomes]
rs1929849	0.94[CHB][hapmap];0.97[CHD][hapmap];1.00[JPT][hapmap];0.93[ASN][1000 genomes]
rs1987673	0.89[CHD][hapmap];0.82[JPT][hapmap];0.85[ASN][1000 genomes]
rs2006184	0.87[ASN][1000 genomes]
rs2018373	0.85[ASN][1000 genomes]
rs2032538	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs2057537	1.00[ASW][hapmap];0.90[LWK][hapmap];0.89[MEX][hapmap];0.81[MKK][hapmap];1.00[TSI][hapmap]
rs2071920	0.89[CHD][hapmap];0.82[JPT][hapmap];0.82[ASN][1000 genomes]
rs2183834	0.85[ASN][1000 genomes]
rs2267657	0.89[CHD][hapmap];0.82[JPT][hapmap];0.81[ASN][1000 genomes]
rs2267658	0.90[ASN][1000 genomes]
rs2267660	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2267661	0.95[JPT][hapmap];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2267662	0.94[CHB][hapmap];0.97[CHD][hapmap];1.00[JPT][hapmap];0.92[ASN][1000 genomes]
rs2267663	0.94[CHB][hapmap];1.00[JPT][hapmap];0.91[ASN][1000 genomes]
rs2267664	1.00[CEU][hapmap];1.00[JPT][hapmap];0.81[AFR][1000 genomes];1.00[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2284195	0.91[ASN][1000 genomes]
rs2296194	1.00[ASW][hapmap];0.82[LWK][hapmap];0.89[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap]
rs2395614	0.81[JPT][hapmap];0.84[ASN][1000 genomes]
rs34156110	0.81[ASN][1000 genomes]
rs3756855	0.82[AFR][1000 genomes]
rs3777744	0.86[CHD][hapmap];0.82[JPT][hapmap]
rs3798342	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs3798343	0.91[CHD][hapmap];0.91[GIH][hapmap];0.95[JPT][hapmap];1.00[TSI][hapmap];0.81[ASN][1000 genomes]
rs3800382	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.91[AFR][1000 genomes];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs3800383	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.87[AFR][1000 genomes];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs3800385	0.94[CHB][hapmap];0.94[CHD][hapmap];1.00[JPT][hapmap];0.93[ASN][1000 genomes]
rs3800386	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3800387	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3800388	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3800392	0.87[CHB][hapmap];1.00[JPT][hapmap];0.95[ASN][1000 genomes]
rs3800393	0.84[ASN][1000 genomes]
rs3800396	0.87[ASN][1000 genomes]
rs3800398	0.87[ASN][1000 genomes]
rs3800399	0.88[ASN][1000 genomes]
rs3800400	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs4583983	0.81[AFR][1000 genomes];1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs4711409	0.94[ASN][1000 genomes]
rs4711411	0.94[CHB][hapmap];0.94[CHD][hapmap];1.00[JPT][hapmap];0.91[ASN][1000 genomes]
rs4711413	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4711414	0.92[ASN][1000 genomes]
rs4713841	0.87[ASN][1000 genomes]
rs4713845	0.94[CHB][hapmap];1.00[JPT][hapmap];0.91[ASN][1000 genomes]
rs4713848	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4713850	0.81[ASN][1000 genomes]
rs58925593	0.91[AFR][1000 genomes];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs62403575	0.92[ASN][1000 genomes]
rs6457812	0.82[JPT][hapmap];0.82[ASN][1000 genomes]
rs68164647	0.88[ASN][1000 genomes]
rs6902523	0.94[CHB][hapmap];1.00[JPT][hapmap];0.92[ASN][1000 genomes]
rs6907324	0.92[ASN][1000 genomes]
rs6907573	0.85[ASN][1000 genomes]
rs6907795	0.87[ASN][1000 genomes]
rs6913037	0.94[CHB][hapmap];1.00[JPT][hapmap];0.91[ASN][1000 genomes]
rs6913941	0.88[ASN][1000 genomes]
rs6916364	0.88[ASN][1000 genomes]
rs6920747	0.92[ASN][1000 genomes]
rs6927730	0.88[ASN][1000 genomes]
rs6928769	0.95[ASN][1000 genomes]
rs6933979	0.80[CHD][hapmap]
rs6938946	0.88[CHB][hapmap];0.97[CHD][hapmap];1.00[JPT][hapmap];0.88[ASN][1000 genomes]
rs6940375	0.80[ASN][1000 genomes]
rs6941471	0.81[ASN][1000 genomes]
rs72909061	0.95[ASN][1000 genomes]
rs7763946	0.93[ASN][1000 genomes]
rs7769906	0.91[ASN][1000 genomes]
rs7772212	0.92[ASN][1000 genomes]
rs8205	0.82[ASN][1000 genomes]
rs914547	0.94[CHB][hapmap];0.94[CHD][hapmap];1.00[JPT][hapmap];0.94[ASN][1000 genomes]
rs9296144	0.94[CHB][hapmap];0.95[JPT][hapmap];0.91[ASN][1000 genomes]
rs9296150	0.89[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs9348962	1.00[ASW][hapmap];0.90[LWK][hapmap];0.89[MEX][hapmap];1.00[TSI][hapmap]
rs9348974	0.89[EUR][1000 genomes]
rs9357194	1.00[GIH][hapmap];0.89[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap]
rs9366882	0.82[JPT][hapmap];0.82[ASN][1000 genomes]
rs9366883	0.94[CHB][hapmap];1.00[JPT][hapmap];0.91[ASN][1000 genomes]
rs9366885	0.81[AFR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs9368852	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9368853	0.95[AFR][1000 genomes];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9368857	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9368859	1.00[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9368860	0.95[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9368865	0.89[EUR][1000 genomes]
rs9380491	1.00[CEU][hapmap]
rs9380492	1.00[ASW][hapmap];0.90[LWK][hapmap];0.89[MEX][hapmap];0.81[MKK][hapmap];1.00[TSI][hapmap]
rs9380498	0.88[ASN][1000 genomes]
rs9380500	0.88[CHB][hapmap];1.00[JPT][hapmap]
rs9380501	0.94[CHB][hapmap];1.00[JPT][hapmap];0.92[ASN][1000 genomes]
rs9380502	0.87[AFR][1000 genomes];0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs9380505	0.89[EUR][1000 genomes]
rs9380507	0.89[EUR][1000 genomes]
rs9394283	0.93[ASN][1000 genomes]
rs9394288	0.94[CHB][hapmap];1.00[JPT][hapmap]
rs9394289	0.91[ASN][1000 genomes]
rs9462065	0.82[JPT][hapmap]
rs9462072	1.00[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs9469964	0.94[CHB][hapmap];0.94[CHD][hapmap];1.00[JPT][hapmap];0.93[ASN][1000 genomes]
rs9469972	0.89[CHD][hapmap];0.82[JPT][hapmap];0.82[ASN][1000 genomes]
rs9469975	0.82[ASN][1000 genomes]
rs9469979	0.91[ASN][1000 genomes]
rs9469982	0.82[JPT][hapmap];0.82[ASN][1000 genomes]
rs9469997	0.81[ASN][1000 genomes]
rs965272	0.81[CHB][hapmap];0.81[JPT][hapmap];0.82[ASN][1000 genomes]
rs968828	0.85[ASN][1000 genomes]
rs975496	0.94[CHB][hapmap];1.00[JPT][hapmap];0.92[ASN][1000 genomes]
rs991145	0.93[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3428128	chr6:35150524-35225843	Bivalent Enhancer Enhancers Genic enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Strong transcription Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
2	esv2758047	chr6:35168116-35291002	Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Strong transcription Active TSS Weak transcription Bivalent/Poised TSS Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	26 gene(s)	inside rSNPs	diseases
3	esv2759419	chr6:35168116-35291002	Weak transcription Flanking Active TSS Active TSS Enhancers Genic enhancers Strong transcription Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	26 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:113 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:35180400-35182600	Bivalent/Poised TSS	iPS-15b Cell Line	embryonic stem cell
2	chr6:35180600-35181400	Flanking Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
3	chr6:35180600-35181400	Flanking Active TSS	Osteobl	bone
4	chr6:35180800-35181400	Flanking Active TSS	H9 Derived Neuron Cultured Cells	ES cell derived
5	chr6:35180800-35181400	Flanking Bivalent TSS/Enh	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
6	chr6:35180800-35181400	Flanking Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
7	chr6:35180800-35181400	Bivalent/Poised TSS	Rectal Smooth Muscle	rectum
8	chr6:35180800-35181600	Flanking Active TSS	Fetal Heart	heart
9	chr6:35180800-35182200	Bivalent/Poised TSS	Fetal Brain Female	brain
10	chr6:35181000-35181400	Flanking Bivalent TSS/Enh	H1 Cell Line	embryonic stem cell
11	chr6:35181000-35181400	Flanking Bivalent TSS/Enh	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
12	chr6:35181000-35181400	Flanking Active TSS	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
13	chr6:35181000-35181400	Bivalent/Poised TSS	H9 Cell Line	embryonic stem cell
14	chr6:35181000-35181400	Flanking Bivalent TSS/Enh	HUES6 Cell Line	embryonic stem cell
15	chr6:35181000-35181400	Flanking Bivalent TSS/Enh	IMR90 fetal lung fibroblasts Cell Line	lung
16	chr6:35181000-35181400	Flanking Bivalent TSS/Enh	iPS DF 19.11 Cell Line	embryonic stem cell
17	chr6:35181000-35181400	Bivalent Enhancer	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
18	chr6:35181000-35181400	Bivalent Enhancer	Primary T helper cells fromperipheralblood	blood
19	chr6:35181000-35181400	Flanking Active TSS	Brain Anterior Caudate	brain
20	chr6:35181000-35181400	Flanking Active TSS	Brain Inferior Temporal Lobe	brain
21	chr6:35181000-35181400	Flanking Bivalent TSS/Enh	Fetal Intestine Large	intestine
22	chr6:35181000-35181400	Flanking Bivalent TSS/Enh	Fetal Muscle Trunk	muscle
23	chr6:35181000-35181400	Flanking Bivalent TSS/Enh	Fetal Stomach	stomach
24	chr6:35181000-35181400	Bivalent Enhancer	Skeletal Muscle Male	skeletal muscle
25	chr6:35181000-35181400	Bivalent Enhancer	Skeletal Muscle Female	skeletal muscle
26	chr6:35181000-35181600	Bivalent Enhancer	Primary B cells from peripheral blood	blood
27	chr6:35181000-35181600	Flanking Bivalent TSS/Enh	Foreskin Fibroblast Primary Cells skin01	Skin
28	chr6:35181000-35181600	Bivalent Enhancer	Placenta	Placenta
29	chr6:35181000-35181600	Enhancers	Lung	lung
30	chr6:35181000-35181800	Bivalent Enhancer	Primary Natural Killer cells fromperipheralblood	blood
31	chr6:35181000-35181800	Flanking Bivalent TSS/Enh	Duodenum Smooth Muscle	Duodenum
32	chr6:35181000-35182000	Flanking Bivalent TSS/Enh	Stomach Smooth Muscle	stomach
33	chr6:35181000-35182200	Bivalent/Poised TSS	Brain Germinal Matrix	brain
34	chr6:35181000-35182400	Bivalent/Poised TSS	Duodenum Mucosa	Duodenum
35	chr6:35181000-35182600	Bivalent/Poised TSS	HUES48 Cell Line	embryonic stem cell
36	chr6:35181000-35182600	Bivalent/Poised TSS	iPS-18 Cell Line	embryonic stem cell
37	chr6:35181000-35182600	Bivalent/Poised TSS	iPS-20b Cell Line	embryonic stem cell
38	chr6:35181000-35182600	Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
39	chr6:35181000-35182600	Flanking Bivalent TSS/Enh	Primary hematopoietic stem cells G-CSF-mobilized Female	--
40	chr6:35181000-35182600	Flanking Bivalent TSS/Enh	Foreskin Fibroblast Primary Cells skin02	Skin
41	chr6:35181000-35182600	Bivalent Enhancer	Stomach Mucosa	stomach
42	chr6:35181000-35182800	Bivalent/Poised TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
43	chr6:35181000-35183000	Bivalent/Poised TSS	ES-WA7 Cell Line	embryonic stem cell
44	chr6:35181000-35183000	Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
45	chr6:35181200-35181400	Bivalent/Poised TSS	iPS DF 6.9 Cell Line	embryonic stem cell
46	chr6:35181200-35181400	Flanking Active TSS	ES-UCSF4 Cell Line	embryonic stem cell
47	chr6:35181200-35181400	Flanking Bivalent TSS/Enh	Breast Myoepithelial Primary Cells	Breast
48	chr6:35181200-35181400	Flanking Bivalent TSS/Enh	Primary B cells from cord blood	blood
49	chr6:35181200-35181400	Flanking Bivalent TSS/Enh	Primary T cells from cord blood	blood
50	chr6:35181200-35181400	Flanking Bivalent TSS/Enh	Primary T cells fromperipheralblood	blood

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links