Variant report

Variant rs1888822
Chromosome Location chr6:35183149-35183150
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:61 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:35181200-35183200 Bivalent/Poised TSS ES-I3 Cell Line embryonic stem cell
2 chr6:35181200-35183200 Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr6:35181200-35183200 Bivalent/Poised TSS HUES64 Cell Line embryonic stem cell
4 chr6:35181200-35184000 Active TSS Aorta Aorta
5 chr6:35181200-35185200 Active TSS Fetal Kidney kidney
6 chr6:35181400-35183200 Active TSS Right Ventricle heart
7 chr6:35181400-35183200 Active TSS Osteobl bone
8 chr6:35182200-35183800 Flanking Bivalent TSS/Enh Fetal Brain Female brain
9 chr6:35182400-35183400 Active TSS Right Atrium heart
10 chr6:35182400-35183600 Flanking Active TSS NH-A brain
11 chr6:35182400-35183800 Flanking Active TSS Muscle Satellite Cultured Cells --
12 chr6:35182400-35185000 Bivalent Enhancer Fetal Lung lung
13 chr6:35182400-35209000 Weak transcription A549 lung
14 chr6:35182600-35183200 Bivalent/Poised TSS H9 Cell Line embryonic stem cell
15 chr6:35182600-35183200 Bivalent Enhancer iPS DF 19.11 Cell Line embryonic stem cell
16 chr6:35182600-35183200 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
17 chr6:35182600-35183200 Enhancers Ovary ovary
18 chr6:35182600-35183200 Bivalent Enhancer Skeletal Muscle Male skeletal muscle
19 chr6:35182600-35183200 Bivalent Enhancer Skeletal Muscle Female skeletal muscle
20 chr6:35182600-35183200 Bivalent Enhancer HepG2 liver
21 chr6:35182600-35183400 Bivalent Enhancer H1 Derived Mesenchymal Stem Cells ES cell derived
22 chr6:35182600-35183400 Bivalent Enhancer Cortex derived primary cultured neurospheres brain
23 chr6:35182600-35183400 Bivalent Enhancer Brain Hippocampus Middle brain
24 chr6:35182600-35183400 Enhancers Fetal Heart heart
25 chr6:35182600-35183400 Bivalent Enhancer Stomach Smooth Muscle stomach
26 chr6:35182600-35183600 Bivalent Enhancer Fetal Adrenal Gland Adrenal Gland
27 chr6:35182600-35183600 Bivalent Enhancer Fetal Muscle Trunk muscle
28 chr6:35182600-35183600 Bivalent Enhancer Fetal Muscle Leg muscle
29 chr6:35182600-35183800 Flanking Bivalent TSS/Enh HUES48 Cell Line embryonic stem cell
30 chr6:35182600-35183800 Flanking Bivalent TSS/Enh iPS-18 Cell Line embryonic stem cell
31 chr6:35182600-35183800 Flanking Bivalent TSS/Enh iPS-20b Cell Line embryonic stem cell
32 chr6:35182600-35184800 Bivalent Enhancer H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
33 chr6:35182600-35184800 Weak transcription HSMM muscle
34 chr6:35182600-35185400 Flanking Active TSS H9 Derived Neuron Cultured Cells ES cell derived
35 chr6:35182600-35186600 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
36 chr6:35182600-35186600 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
37 chr6:35182600-35186600 Enhancers Placenta Amnion Placenta Amnion
38 chr6:35182600-35198600 Weak transcription Gastric stomach
39 chr6:35182800-35183200 Flanking Bivalent TSS/Enh Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
40 chr6:35182800-35183200 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
41 chr6:35182800-35183200 Bivalent/Poised TSS Duodenum Smooth Muscle Duodenum
42 chr6:35182800-35183200 Flanking Bivalent TSS/Enh Fetal Stomach stomach
43 chr6:35182800-35183400 Bivalent Enhancer Brain Germinal Matrix brain
44 chr6:35182800-35183600 Flanking Bivalent TSS/Enh hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
45 chr6:35182800-35183600 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
46 chr6:35182800-35183600 Bivalent Enhancer Brain Anterior Caudate brain
47 chr6:35182800-35184000 Bivalent Enhancer Fetal Brain Male brain
48 chr6:35182800-35184800 Bivalent Enhancer iPS DF 6.9 Cell Line embryonic stem cell
49 chr6:35182800-35186600 Enhancers ES-UCSF4 Cell Line embryonic stem cell
50 chr6:35182800-35188000 Enhancers Left Ventricle heart

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