Variant report

Variant rs9380501
Chromosome Location chr6:35270579-35270580
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:96 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:35263200-35270600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
2 chr6:35263200-35270600 Weak transcription NHDF-Ad bronchial
3 chr6:35265200-35270600 Weak transcription HSMM muscle
4 chr6:35265200-35285600 Weak transcription Brain Substantia Nigra brain
5 chr6:35265400-35272200 Weak transcription Fetal Brain Female brain
6 chr6:35266000-35270800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
7 chr6:35266000-35271000 Weak transcription Left Ventricle heart
8 chr6:35266000-35271000 Weak transcription Right Ventricle heart
9 chr6:35266000-35272000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
10 chr6:35266200-35270600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
11 chr6:35266200-35270800 Weak transcription Skeletal Muscle Female skeletal muscle
12 chr6:35266400-35270600 Weak transcription HUES48 Cell Line embryonic stem cell
13 chr6:35266400-35270600 Weak transcription iPS-20b Cell Line embryonic stem cell
14 chr6:35266400-35270600 Weak transcription HUVEC blood vessel
15 chr6:35266600-35270600 Weak transcription iPS-15b Cell Line embryonic stem cell
16 chr6:35266600-35270800 Flanking Active TSS Primary T regulatory cells fromperipheralblood blood
17 chr6:35266600-35272000 Weak transcription Gastric stomach
18 chr6:35266600-35279800 Weak transcription Fetal Stomach stomach
19 chr6:35266800-35277400 Weak transcription Pancreas Pancrea
20 chr6:35267400-35272400 Enhancers Small Intestine intestine
21 chr6:35268400-35270600 Enhancers Primary B cells from peripheral blood blood
22 chr6:35268600-35271000 Enhancers Primary hematopoietic stem cells blood
23 chr6:35268600-35278600 Weak transcription Duodenum Smooth Muscle Duodenum
24 chr6:35268800-35270600 Weak transcription Colonic Mucosa Colon
25 chr6:35269000-35272400 Enhancers Primary monocytes fromperipheralblood blood
26 chr6:35269200-35270800 Genic enhancers Fetal Thymus thymus
27 chr6:35269200-35273200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
28 chr6:35269600-35270600 Genic enhancers Breast Myoepithelial Primary Cells Breast
29 chr6:35269600-35270600 Enhancers Stomach Mucosa stomach
30 chr6:35269800-35270600 Enhancers Esophagus oesophagus
31 chr6:35269800-35270600 Genic enhancers Placenta Placenta
32 chr6:35269800-35271000 Enhancers Lung lung
33 chr6:35269800-35271400 Flanking Active TSS Primary neutrophils fromperipheralblood blood
34 chr6:35269800-35272200 Flanking Active TSS Primary T helper memory cells from peripheral blood 2 blood
35 chr6:35270000-35270600 Enhancers Duodenum Mucosa Duodenum
36 chr6:35270000-35270600 Enhancers Sigmoid Colon Sigmoid Colon
37 chr6:35270000-35270600 Enhancers HMEC breast
38 chr6:35270000-35270800 Flanking Active TSS Primary T helper naive cells fromperipheralblood blood
39 chr6:35270000-35271200 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
40 chr6:35270000-35271400 Transcr. at gene 5' and 3' Primary hematopoietic stem cells short term culture blood
41 chr6:35270000-35271400 Flanking Active TSS Monocytes-CD14+_RO01746 blood
42 chr6:35270000-35271600 Flanking Active TSS Primary T helper 17 cells PMA-I stimulated --
43 chr6:35270000-35271600 Enhancers Fetal Intestine Small intestine
44 chr6:35270000-35272200 Flanking Active TSS Primary T helper cells PMA-I stimulated --
45 chr6:35270000-35272200 Flanking Active TSS Primary T helper cells fromperipheralblood blood
46 chr6:35270200-35270600 Enhancers ES-I3 Cell Line embryonic stem cell
47 chr6:35270200-35270600 Flanking Active TSS Primary T killer naive cells fromperipheralblood blood
48 chr6:35270200-35270800 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
49 chr6:35270200-35270800 Enhancers K562 blood
50 chr6:35270200-35270800 Enhancers Osteobl bone

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