The 2.0 version of rSNPBase

Variant report

Variant rs2183834
Chromosome Location chr6:35282993-35282994
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:63 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:35265200-35285600 Weak transcription Brain Substantia Nigra brain
2 chr6:35271400-35285000 Weak transcription HepG2 liver
3 chr6:35271600-35285200 Weak transcription Fetal Intestine Large intestine
4 chr6:35271600-35285600 Weak transcription Placenta Amnion Placenta Amnion
5 chr6:35272400-35284600 Weak transcription HMEC breast
6 chr6:35272400-35285400 Weak transcription Gastric stomach
7 chr6:35276000-35293800 Weak transcription K562 blood
8 chr6:35277000-35285400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr6:35278200-35285600 Weak transcription Colonic Mucosa Colon
10 chr6:35278600-35285400 Weak transcription Pancreas Pancrea
11 chr6:35279000-35285400 Weak transcription Esophagus oesophagus
12 chr6:35279000-35285600 Weak transcription Sigmoid Colon Sigmoid Colon
13 chr6:35279400-35285400 Weak transcription Right Atrium heart
14 chr6:35280000-35285200 Weak transcription Skeletal Muscle Female skeletal muscle
15 chr6:35280000-35285400 Weak transcription Rectal Smooth Muscle rectum
16 chr6:35280200-35283000 Enhancers Primary T helper memory cells from peripheral blood 1 blood
17 chr6:35280200-35285200 Weak transcription Duodenum Smooth Muscle Duodenum
18 chr6:35280200-35285400 Weak transcription Left Ventricle heart
19 chr6:35280200-35285600 Genic enhancers Primary T helper memory cells from peripheral blood 2 blood
20 chr6:35280200-35285600 Weak transcription Rectal Mucosa Donor 31 rectum
21 chr6:35280400-35283200 Enhancers Primary T killer naive cells fromperipheralblood blood
22 chr6:35280400-35285000 Genic enhancers Primary T helper cells fromperipheralblood blood
23 chr6:35280400-35285400 Weak transcription Fetal Stomach stomach
24 chr6:35280600-35283000 Enhancers Primary T cells from cord blood blood
25 chr6:35280600-35283000 Genic enhancers Primary T helper cells PMA-I stimulated --
26 chr6:35280600-35284000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
27 chr6:35280600-35285000 Weak transcription Spleen Spleen
28 chr6:35280600-35285200 Weak transcription Fetal Intestine Small intestine
29 chr6:35280600-35285200 Weak transcription Placenta Placenta
30 chr6:35280600-35285400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
31 chr6:35280600-35285400 Weak transcription Liver Liver
32 chr6:35280600-35285600 Weak transcription Lung lung
33 chr6:35280800-35283000 Enhancers Primary T helper naive cells from peripheral blood blood
34 chr6:35280800-35283000 Enhancers Primary T killer memory cells from peripheral blood blood
35 chr6:35280800-35284200 Weak transcription GM12878-XiMat blood
36 chr6:35280800-35285000 Weak transcription Rectal Mucosa Donor 29 rectum
37 chr6:35280800-35285200 Weak transcription Duodenum Mucosa Duodenum
38 chr6:35280800-35285200 Weak transcription Thymus Thymus
39 chr6:35280800-35285400 Weak transcription Adipose Nuclei Adipose
40 chr6:35280800-35285600 Strong transcription Fetal Thymus thymus
41 chr6:35280800-35293200 Strong transcription Primary Natural Killer cells fromperipheralblood blood
42 chr6:35281000-35284000 Weak transcription Dnd41 blood
43 chr6:35281000-35284400 Genic enhancers Primary T regulatory cells fromperipheralblood blood
44 chr6:35281000-35285400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
45 chr6:35281000-35285600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
46 chr6:35281000-35285800 Weak transcription NHEK skin
47 chr6:35281600-35283400 Weak transcription Primary B cells from cord blood blood
48 chr6:35281600-35291600 Strong transcription Primary B cells from peripheral blood blood
49 chr6:35281800-35284000 Enhancers Primary T helper naive cells fromperipheralblood blood
50 chr6:35281800-35284200 Weak transcription Primary hematopoietic stem cells blood

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Last update: Aug 31, 2015