Variant report

Variant	rs3756855
Chromosome Location	chr6:35111298-35111299
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:35111236..35113031-chr6:35124115..35126348,2	K562	blood:

Extended variants
information (count: 29 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:29)

rs_ID	r²[population]
rs16872324	0.87[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs16872484	1.00[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs1894652	0.82[AFR][1000 genomes]
rs1894653	0.82[AFR][1000 genomes]
rs2057537	0.89[AMR][1000 genomes];0.89[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs2296194	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs3798342	0.82[AFR][1000 genomes]
rs3800386	0.82[AFR][1000 genomes]
rs3800387	0.82[AFR][1000 genomes]
rs3800388	0.82[AFR][1000 genomes]
rs3800400	0.86[AFR][1000 genomes]
rs4711413	0.82[AFR][1000 genomes]
rs4713848	0.82[AFR][1000 genomes]
rs6457803	0.87[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs6908059	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6940278	0.81[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs73745098	0.86[AMR][1000 genomes];1.00[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs73745102	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs765063	0.86[ASN][1000 genomes]
rs9348965	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs9348966	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9357194	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9368853	0.86[AFR][1000 genomes]
rs9368854	0.82[AFR][1000 genomes]
rs9368857	0.82[AFR][1000 genomes]
rs9380488	0.86[AMR][1000 genomes];1.00[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs9380492	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9380493	0.81[AFR][1000 genomes];0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs960716	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];0.82[ASN][1000 genomes]

No data

Chromatin state (count:27 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:35104400-35114000	Weak transcription	Brain Cingulate Gyrus	brain
2	chr6:35106000-35113600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
3	chr6:35106200-35113400	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
4	chr6:35108200-35113600	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
5	chr6:35108200-35113800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
6	chr6:35108200-35113800	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
7	chr6:35108200-35114400	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
8	chr6:35108200-35114600	Weak transcription	Rectal Smooth Muscle	rectum
9	chr6:35109200-35113600	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
10	chr6:35109200-35114000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
11	chr6:35110200-35111400	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
12	chr6:35110200-35111400	Enhancers	Muscle Satellite Cultured Cells	--
13	chr6:35110200-35111400	Enhancers	Osteobl	bone
14	chr6:35110200-35117000	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
15	chr6:35110400-35111400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
16	chr6:35110400-35111400	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
17	chr6:35110400-35111400	Enhancers	Fetal Kidney	kidney
18	chr6:35110400-35111400	Enhancers	A549	lung
19	chr6:35110600-35111400	Enhancers	HepG2	liver
20	chr6:35110600-35116000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
21	chr6:35110600-35116000	Weak transcription	HSMMtube	muscle
22	chr6:35110800-35113400	Weak transcription	Fetal Stomach	stomach
23	chr6:35110800-35116000	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
24	chr6:35111000-35115800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
25	chr6:35111200-35113600	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
26	chr6:35111200-35113800	Weak transcription	NHDF-Ad	bronchial
27	chr6:35111200-35115800	Weak transcription	HSMM	muscle

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